Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1038g00009 ATGAACGAAAGCTCAGAGACCCACAAGCGTGAAGCTGATTCAGAAATCAAGGAGGATCTTGTTGCGTCGAAGAAGTCGAGGACCGAATCTTCTGAAGTTGGTTTGGATGAAAATGCTGTAAAGGTAGTAACTTTCCACATTGAAGCTGATGCTGCTGAGGATAAGGGTTCTAGGCATACCATGGAAGATGCATGTGTGGTGCTTCTGGATGCAAGTCTAGATTACCCTGGAAATTTGAGGTGTGCACATTTTGCAATTTATGATGGACACGGAGGCAGGTTAGCTGCAGAATATGCGCAAAAGCATTTGCATGGGAATGTCCTTTCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGGCAGCTAAAAAATCTATACTTGACGGTTTTCGTAAAACTGATGAGGCTCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCCGTATGTGTTTGGGTATTGGGACAAAAAGTTTTTGTGGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAACTATAACTGATGGATTCCAAGATCACTCAGATGGAGTCCCTGCACTAAAGGCCATTGTTTTGACGAGAGAACACAAACCTATCTTCCCGCAGGAGCGTGCACGTATTCAGAAGGCTGGTGGTGTTGTGAGCTCAAATGGACGATTACAAGGGCGTCTAGAAGTTTCTAGGGGTTTTGGAGATCGCCAGTTCAAAAAGGTGGGTTTTATTGCAACCCCAGATATCCATTCTTTTGACCTGACAGATAGAGAGCATTTCATCATTCTTGGCTGTGATGGTTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGACTACCCGTTGCGGTCGTGAGCCGCCGTCTTGTAAGAGAAGCTGTTCGTGAGCGTCGATGTAAAGATAACTGCACTGCAATTGTCATTGTATTCAGGCGCAATTAA 978 0.4509 MNESSETHKREADSEIKEDLVASKKSRTESSEVGLDENAVKVVTFHIEADAAEDKGSRHTMEDACVVLLDASLDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLSAGLPRELLDVKAAKKSILDGFRKTDEALLQESAEGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARSTITDGFQDHSDGVPALKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEVSRGFGDRQFKKVGFIATPDIHSFDLTDREHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVAVVSRRLVREAVRERRCKDNCTAIVIVFRRN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1038g00009 325 PANTHER PROTEIN PHOSPHATASE 2C 26 320 IPR015655 GO:0004722|GO:0006470
Gabi1038g00009 325 CDD PP2Cc 52 322 IPR001932 -
Gabi1038g00009 325 MobiDBLite consensus disorder prediction 1 33 - -
Gabi1038g00009 325 SMART PP2C_4 44 320 IPR001932 -
Gabi1038g00009 325 FunFam Probable protein phosphatase 2C 67 36 324 - -
Gabi1038g00009 325 Pfam Protein phosphatase 2C 52 310 IPR001932 -
Gabi1038g00009 325 Gene3D - 25 325 IPR036457 -
Gabi1038g00009 325 ProSiteProfiles PPM-type phosphatase domain profile. 48 322 IPR001932 -
Gabi1038g00009 325 SUPERFAMILY PP2C-like 44 323 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1038g00009 Gabi-Chr1038 189725 194159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1038g00009 7 274 PP2C-type Phosphatase Gene Family AT1G18030 67.832 1.07e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1038g00009 K17500 - gmx:100815852 499.59