Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1038g00008 ATGAACGAAAGCTCAGAGACCCACAAGCGTGAAGCTGATTCAGAAATCAAGGAGGATCTTGTTGCGTCGAAGAAGTCGAGGACCGAATCTTCTGAAGTTGGTTTGGATGAAAATGCTGTAAAGGTAGTAACTTTCCACATTGAAGCTGATGCTGCTGAGGATAAGGGTTCTAGGCATACCATGGAAGATGCATGTGTGGTGCTTCTGGATGCAAGTCTAGATTACCCTGGAAATTTGAGGTGTGCACATTTTGCAATTTATGATGGACACGGAGGCAGGTTAGCTGCAGAATATGCGCAAAAGCATTTGCATGGGAATGTCCTTTCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGGCAGCTAAAAAATCTATACTTGACGGTTTTCGTAAAACTGATGAGGCTCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCCGTATGTGTTTGGGTATTGGGACAAAAAGTTTTTGTGGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAACTATAACTGATGGATTCCAAGATCACTCAGATGGAGTCCCTGCACTAAAGGCCATTGTTTTGACGAGAGAACACAAACCTATCTTCCCGCAGGAGCGTGCACGTATTCAGAAGGCTGGTGGTGTTGTGAGCTCAAATGGACGATTACAAGGGCGTCTAGAAGTTTCTAGGGGTTTTGGAGATCGCCAGTTCAAAAAGGTGGGTTTTATTGCAACCCCAGATATCCATTCTTTTGACCTGACAGATAGAGAGCATTTCATCATTCTTGGCTGTGATGGTTTGTGGGGGGAGGGACTACCCGTTGCGGTCGTGAGCCGCCGTCTTGTAAGAGAAGCTGTTCGTGAGCGTCGATGTAAAGATAACTGCACTGCAATTGTCATTGTATTCAGGCGCAATTAA 930 0.4559 MNESSETHKREADSEIKEDLVASKKSRTESSEVGLDENAVKVVTFHIEADAAEDKGSRHTMEDACVVLLDASLDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLSAGLPRELLDVKAAKKSILDGFRKTDEALLQESAEGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARSTITDGFQDHSDGVPALKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEVSRGFGDRQFKKVGFIATPDIHSFDLTDREHFIILGCDGLWGEGLPVAVVSRRLVREAVRERRCKDNCTAIVIVFRRN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1038g00008 309 Gene3D - 42 309 IPR036457 -
Gabi1038g00008 309 Pfam Protein phosphatase 2C 52 272 IPR001932 -
Gabi1038g00008 309 SUPERFAMILY PP2C-like 44 307 IPR036457 -
Gabi1038g00008 309 CDD PP2Cc 52 306 IPR001932 -
Gabi1038g00008 309 PANTHER PROTEIN PHOSPHATASE 2C 26 304 IPR015655 GO:0004722|GO:0006470
Gabi1038g00008 309 MobiDBLite consensus disorder prediction 1 33 - -
Gabi1038g00008 309 ProSiteProfiles PPM-type phosphatase domain profile. 48 306 IPR001932 -
Gabi1038g00008 309 SMART PP2C_4 44 304 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1038g00008 Gabi-Chr1038 189725 194160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1038g00008 7 272 PP2C-type Phosphatase Gene Family AT1G18030 67.958 8.20e-136 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1038g00008 K17500 - gmx:100815852 457.988