Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1036g00006 ATGGAAGCTCCTAGATTAGTTGTAGTCTTATCTTCCTTGCTGCTTCTCTTAACTAGTGCACAAACAAGCTCTGCTCAACTTGAAGAAGTTCCAACAGACCTTACTCTCGGTTTCTACAACAATATATGCCCCAATGTGGAACAATTGGTTCGCTCTGCTGTGGTGAAGAAGTTCCAAGAGACCTTTGCGACTGCTCCTGCCACTCTACGACTCTTCTTCCATGATTGCTTTGTGCAGGGTTGTGATGCTTCCATTTTGCTGGCATCTCCAAATGGTCAAGCAGAGAAAGATAATCCTATTAACCTTTCATTAGCTGAGGATGGCTTTGACACGGTGATTCAAGCTAAAGCAGCAGTTGATAGTGATCCTCAGTGCACAAACAAAGTCTCTTGTGCTGATATACTTGCTCTTGCTACCAGAGATGTTATAAATTTGACTGGGGGACCATTTTATAATGTTGAATTGGGAAGGCGTGACGGGAGAATATCTACTATTGCAAATGTTGAAGACCATCTTCCTCAACATTACTTCAATTTGGATCAGCTCATTTCCACGTTTAGCTCCAATGGTCTCTCCCTTGTAGAAATGATTCCAATATATGGTGCACATACAATTGGACGGGCTCATTGCAATGTCATGTCAAAACGAATCTACAACTTCAGCACCACAAATAGAATTGACCCAACACTAAATTTACAATATGCCACGCAGCTTAGACAAGAGTGTCCTCTAGGAGTTGATCCTAGAATCGCCGTAGACATGGACCCTGTCACACCTCAAAGATTTGATAATCAGTACTTCAAGAATCTGCAGCAAGGAATGGGTCCAAGCACTTCTGATCAGGTGATGTTCACAGATGAAAGGTCAAAGGATTTAGTCAACTTATATGCATCAAATGAAGAAGCTTTTAGGAGTGCTTTTGTTGATGCTATTACTAAGATGGGAAGGATAAATGTTAAAACTGGAAATCAAGGTGAAATAAGGATTGATTGCAGCAAAGTGAACTAA 1008 0.4107 MEAPRLVVVLSSLLLLLTSAQTSSAQLEEVPTDLTLGFYNNICPNVEQLVRSAVVKKFQETFATAPATLRLFFHDCFVQGCDASILLASPNGQAEKDNPINLSLAEDGFDTVIQAKAAVDSDPQCTNKVSCADILALATRDVINLTGGPFYNVELGRRDGRISTIANVEDHLPQHYFNLDQLISTFSSNGLSLVEMIPIYGAHTIGRAHCNVMSKRIYNFSTTNRIDPTLNLQYATQLRQECPLGVDPRIAVDMDPVTPQRFDNQYFKNLQQGMGPSTSDQVMFTDERSKDLVNLYASNEEAFRSAFVDAITKMGRINVKTGNQGEIRIDCSKVN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1036g00006 335 CDD secretory_peroxidase 34 334 IPR033905 GO:0004601|GO:0042744
Gabi1036g00006 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PANTHER - 8 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 FunFam Peroxidase 173 314 - -
Gabi1036g00006 335 Gene3D Peroxidase, domain 2 173 314 - -
Gabi1036g00006 335 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Gabi1036g00006 335 Pfam Peroxidase 51 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 Gene3D - 37 335 - -
Gabi1036g00006 335 ProSiteProfiles Plant heme peroxidase family profile. 33 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00006 335 FunFam Peroxidase 37 181 - -
Gabi1036g00006 335 SUPERFAMILY Heme-dependent peroxidases 34 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1036g00006 Gabi-Chr1036 53336 54797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1036g00006 30 335 Peroxidase AT4G30170 66.340 3.80e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1036g00006 K00430 - gmx:100804620 469.929