Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1036g00005 ATGGACTTAGCCTATGCTCATGACTTTGTCTTATCTTCCTTGCTGCTTCTCTTAACTAGTGCACAAACAAGCTCTGCTCAACTTGAAGAAGTTCCAACAGACCTTACTCTCGGTTTCTACAACAATATATGCCCCAATGTGGAACAATTGGTTCGCTCTGCTGTGGTGAAGAAGTTCCAAGAGACCTTTGCGACTGCTCCTGCCACTCTACGACTCTTCTTCCATGATTGCTTTGTGCAGGGTTGTGATGCTTCCATTTTGCTGGCATCTCCAAATGGTCAAGCAGAGAAAGATAATCCTATTAACCTTTCATTAGCTGAGGATGGCTTTGACACGGTGATTCAAGCTAAAGCAGCAGTTGATAGTGATCCTCAGTGCACAAACAAAGTCTCTTGTGCTGATATACTTGCTCTTGCTACCAGAGATGTTATAAATTTGACTGGGGGACCATTTTATAATGTTGAATTGGGAAGGCGTGACGGGAGAATATCTACTATTGCAAATGTTGAAGACCATCTTCCTCAACATTACTTCAATTTGGATCAGCTCATTTCCACGTTTAGCTCCAATGGTCTCTCCCTTGTAGAAATGATTCCAATATATGGTGCACATACAATTGGACGGGCTCATTGCAATGTCATGTCAAAACGAATCTACAACTTCAGCACCACAAATAGAATTGACCCAACACTAAATTTACAATATGCCACGCAGCTTAGACAAGAGTGTCCTCTAGGAGTTGATCCTAGAATCGCCGTAGACATGGACCCTGTCACACCTCAAAGATTTGATAATCAGTACTTCAAGAATCTGCAGCAAGGAATGGGTCCAAGCACTTCTGATCAGGTGATGTTCACAGATGAAAGGTCAAAGGATTTAGTCAACTTATATGCATCAAATGAAGAAGCTTTTAGGAGTGCTTTTGTTGATGCTATTACTAAGATGGGAAGGATAAATGTTAAAACTGGAAATCAAGGTGAAATAAGGATTGATTGCAGCAAAGTGAACTAA 1011 0.4115 MDLAYAHDFVLSSLLLLLTSAQTSSAQLEEVPTDLTLGFYNNICPNVEQLVRSAVVKKFQETFATAPATLRLFFHDCFVQGCDASILLASPNGQAEKDNPINLSLAEDGFDTVIQAKAAVDSDPQCTNKVSCADILALATRDVINLTGGPFYNVELGRRDGRISTIANVEDHLPQHYFNLDQLISTFSSNGLSLVEMIPIYGAHTIGRAHCNVMSKRIYNFSTTNRIDPTLNLQYATQLRQECPLGVDPRIAVDMDPVTPQRFDNQYFKNLQQGMGPSTSDQVMFTDERSKDLVNLYASNEEAFRSAFVDAITKMGRINVKTGNQGEIRIDCSKVN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1036g00005 336 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 ProSiteProfiles Plant heme peroxidase family profile. 34 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 SUPERFAMILY Heme-dependent peroxidases 35 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PANTHER - 14 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Gabi1036g00005 336 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 Pfam Peroxidase 52 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1036g00005 336 Gene3D - 38 336 - -
Gabi1036g00005 336 FunFam Peroxidase 38 182 - -
Gabi1036g00005 336 FunFam Peroxidase 174 315 - -
Gabi1036g00005 336 Gene3D Peroxidase, domain 2 174 315 - -
Gabi1036g00005 336 CDD secretory_peroxidase 35 335 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1036g00005 Gabi-Chr1036 46361 54797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1036g00005 31 336 Peroxidase AT4G30170 66.340 4.13e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1036g00005 K00430 - gmx:100804620 469.929