Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00156 ATGAAACCTTTTCTTCTCTTTCTCACATTCTCCTTCTTTTGCCAGACAAACTTAGTTTTCTCTGCTACAGCTCTGCCCCTCCAACTCATCACCTTGCTTTCAATAAAATCCTCACTCATAGACCCTCTCAAGAACCTCCATGACTGGGACCCCTCCTCCACCTTCTCCAAGCCTAGTTACCAAGACCCAGTATGGTGTACCTGGAGAGCCATCACATGCCACCCAAAAACAGCACAAATCACCAACCTTGACCTCTCTCGCCTCAACCTTTCAGGCACAGTCTCACGTCAAATCCGCTACCTATCCAGCTTAAACCACTTGAACCTCAGTGGAAATGACTTCAGTGGAACCTTCCAAACAGCAATTTTTGAACTCACAGAGCTGAGGACTCTAGATATCAGCCACAACTCCTTCAATTCAACATTCCCACCCGGAATATCAAAGCTCAAGTTTTTAAGGGTCTTCAATGCTTACAGCAACAGCTTCACTGGCCCTCTCCCTCAAGAGTTAAGCAGGCTTCGCTTTCTTGAGCAACTCAACCTCGGTGGAAGCTACTTCCGAGACAGTATCCCACCAGGTTATGGCAGTTTCCCGAGACTCAAGTTCCTAGATTTAGCCGGTAATGCCTTGGAAGGTTCACTACCACCTCAGCTAGGCTCGTTACCACAACTACAACACTTGGAAATCGGGTACAACCCATTCTCGGGAACATTACCAGTGGAATTGGCATTGCTATCTAATCTCAAATACTTGGATATCTCCTTTGCCAACATTTCAGGGCAAGTGATCCCAGAACTGGGAAACTTAACCTCGCTGGAGACCTTGTTGCTCTTCAAGAACCGTTTAAGCGGCGAAATCCCATCAAGCCTAGGCAAATTGAAATCCCTGAAAGCTCTTGACTTGTCAGATAACGAACTGACAGGGCCAATTCCAAGAGAAGTTTCAATGCTAGAGGAACTAACCATATTGAGCCTAATGGACAACAAGCTAACAGGTGAAATACCACAAGGAATTGGAGACCTTCCAAACTTGGACACTCTTCTTCTGTTCAACAATTCATTCACTGGAACCCTCCCACAACAACTTGGCTCCAACGGGTTACTCCAAAGACTAGATGTTTCCACCAACTCACTCCAAGGTCCAATCCCACCAAATGTTTGCAATGGCAACAAACTGGTCAAGCTCATACTCTTCTACAACAATTTCAACAATCCTCTCCCACCATCATTATCCTACTGCACCTCACTCGCAAGGGTTCGAATCCAAAACAACCACCTCAACGGTTCCATTCCAAAAGAGCTCACGCTCCTCCCAAACCTAACATTCCTTGACATGAGCAACAACAATTTCAACGGTCAAATTCCTCAAGACTTGGGCAACCTACAATACCTTAACATCTCCGGAAACTCCTTCGGAGAACCCTTACCAACTAACATATGGAACGCCACCAACCTTCAGATTTTCTCAGCATTTTCTTCAAACATCACAGGTCAGATCCCCGATTTCATTGGTTGCCAAACCATATACAAGATCGAATTGCAGGGAAACTCCATCAACGGTACCATCCCTTGGGACATTGGTCACTGCCAGAAACTCATTCTTCTCAATCTCAGTAGAAACTCCCTCACCGGAATCATCCCTTGGGAAATCTCAGCTCTTCCCTCCATAACCGACGTCGACCTCTCTCACAATTCCCTCACCGGAACCATTCCTTCTAATTTCAACAACTGCACAACACTTGAGAACTTCAACGTCAGCTTCAATTCCCTCACCGGACCCATCCCTTCCTACGGTATCTTCTCCAACCTTCATCCTTCTTCCTACTCCGGCAACCAGGGCCTCTGCGGCGGAATTCTCGCCAAGCCCTGCGCCGCCGACGCACTCTCCGCCGGGGAGAACGAGGTCGAGGTTCGCCGCCAGCAACCGAAGCGAACCGCCGGTGCAATTGTTTGGATCGTGGCGGCGGCGTTCGGGATCGGTCTGTTCGTGCTCGTCGCCGGGACCCGATGCTTCCACGCGAATTATAACCGTGGATTTGGCAACGACGGGAACGAGATCGGACCGTGGAAATTAACGGCTTTTCAGCGGTTGAATTTCACGGCGGAGGATGTGCTCGAGTGCTTGTCGATGTCTGATAAGATATTAGGGATGGGGTCCACTGGGACTGTTTACAGGGCGGAGATGCCAGGTGGCGAGATCATAGCGATTAAAAAGCTCTGGGGGAAGCACAAGGAGAACATCAGACGGAGGAGAGGGGTTTTGGCTGAGGTGGATGTGTTGGGAAACGTGAGGCATAGGAATATTGTGAGGTTGTTAGGGTGTTGCAGCAACAGGGAGAGCACCATGCTGCTTTATGAGTACATGCCTAACGGGAACTTGGATGATTTGTTGCATGGCAAGAATAAAGGGGATAATCTCATTGCTGATTGGTTCACTAGGTATAAGATTGCATTGGGTGTGGCTCAGGGGATTTGCTATCTTCACCACGACTGTGATCCTGTCATCGTGCATCGTGATCTCAAACCCAGTAACATATTATTGGACGGTGAGATGGAGGCCAGAGTGGCTGATTTTGGGGTCGCCAAGTTGATTCAGACAGATGAATCCATGTCTGTCATTGCTGGATCCTACGGCTACATTGCTCCAGAATATGCTTATACACTTCAAGTTGATGAGAAGAGTGATATTTACAGCTATGGGGTTGTGTTAATGGAGATATTAAGCGGAAAACGTTCGGTGGATGCAGAATTTGGCGATGGGAATAGCATTGTGGACTGGGTTAGGTCAAAGATCAAGAGTAAAGATGGCATTGATGGTATATTGGACAAGAATGCAGGGGCAGGGTGCAACTCAGTGAAGGAGGAGATGATACAAATGCTTAGAATTTCATTGCTTTGTACAAGCAGGAACCCAGCAGATAGGCCTTCCATGAGAGATGTTGTGTTGATGCTGCAAGAGGCCAAGCCAAAAAGGAAATTGCTTGATAGTGTTGTAGGTCGAGGTGGTGCTGGTGACAATGTGGTTGGTGGTGGTGGTGATATTCCTTTGGCACAAAAGCCAACTCCGGAAAGCTAA 3075 0.4774 MKPFLLFLTFSFFCQTNLVFSATALPLQLITLLSIKSSLIDPLKNLHDWDPSSTFSKPSYQDPVWCTWRAITCHPKTAQITNLDLSRLNLSGTVSRQIRYLSSLNHLNLSGNDFSGTFQTAIFELTELRTLDISHNSFNSTFPPGISKLKFLRVFNAYSNSFTGPLPQELSRLRFLEQLNLGGSYFRDSIPPGYGSFPRLKFLDLAGNALEGSLPPQLGSLPQLQHLEIGYNPFSGTLPVELALLSNLKYLDISFANISGQVIPELGNLTSLETLLLFKNRLSGEIPSSLGKLKSLKALDLSDNELTGPIPREVSMLEELTILSLMDNKLTGEIPQGIGDLPNLDTLLLFNNSFTGTLPQQLGSNGLLQRLDVSTNSLQGPIPPNVCNGNKLVKLILFYNNFNNPLPPSLSYCTSLARVRIQNNHLNGSIPKELTLLPNLTFLDMSNNNFNGQIPQDLGNLQYLNISGNSFGEPLPTNIWNATNLQIFSAFSSNITGQIPDFIGCQTIYKIELQGNSINGTIPWDIGHCQKLILLNLSRNSLTGIIPWEISALPSITDVDLSHNSLTGTIPSNFNNCTTLENFNVSFNSLTGPIPSYGIFSNLHPSSYSGNQGLCGGILAKPCAADALSAGENEVEVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRGFGNDGNEIGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGEIIAIKKLWGKHKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRESTMLLYEYMPNGNLDDLLHGKNKGDNLIADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVRSKIKSKDGIDGILDKNAGAGCNSVKEEMIQMLRISLLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDSVVGRGGAGDNVVGGGGDIPLAQKPTPES 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00156 1024 Gene3D Phosphorylase Kinase; domain 1 690 787 - -
Gabi102g00156 1024 SMART serkin_6 709 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi102g00156 1024 FunFam leucine-rich repeat receptor-like protein kinase TDR 788 996 - -
Gabi102g00156 1024 SUPERFAMILY L domain-like 310 615 - -
Gabi102g00156 1024 Gene3D Transferase(Phosphotransferase) domain 1 788 998 - -
Gabi102g00156 1024 SUPERFAMILY Protein kinase-like (PK-like) 712 984 IPR011009 -
Gabi102g00156 1024 FunFam Leucine-rich repeat receptor-like protein kinase TDR 314 625 - -
Gabi102g00156 1024 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Gabi102g00156 1024 MobiDBLite consensus disorder prediction 1001 1024 - -
Gabi102g00156 1024 Pfam Leucine rich repeat 271 330 IPR001611 GO:0005515
Gabi102g00156 1024 Pfam Leucine rich repeat 508 566 IPR001611 GO:0005515
Gabi102g00156 1024 Gene3D Ribonuclease Inhibitor 318 629 IPR032675 -
Gabi102g00156 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Gabi102g00156 1024 ProSiteProfiles Protein kinase domain profile. 709 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi102g00156 1024 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 680 787 - -
Gabi102g00156 1024 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 176 979 - -
Gabi102g00156 1024 Gene3D Ribonuclease Inhibitor 29 317 IPR032675 -
Gabi102g00156 1024 SUPERFAMILY RNI-like 82 403 - -
Gabi102g00156 1024 SMART LRR_typ_2 197 221 IPR003591 -
Gabi102g00156 1024 SMART LRR_typ_2 101 120 IPR003591 -
Gabi102g00156 1024 SMART LRR_typ_2 553 576 IPR003591 -
Gabi102g00156 1024 SMART LRR_typ_2 341 365 IPR003591 -
Gabi102g00156 1024 SMART LRR_typ_2 437 461 IPR003591 -
Gabi102g00156 1024 SMART LRR_typ_2 125 149 IPR003591 -
Gabi102g00156 1024 SMART LRR_typ_2 269 293 IPR003591 -
Gabi102g00156 1024 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 72 265 - -
Gabi102g00156 1024 Pfam Protein kinase domain 712 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00156 Gabi-Chr102 1390447 1394408 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00156 3 999 Receptor kinase-like Gene Family AT1G08590 42.747 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gabi102g00156 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00156 - - gmx:100809695 1717.98