Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00153 ATGGGGGAACCTAGTTCTTCTAGGGTTTACCGTACGATTCAGCAGCCCAATGCAGGCATCATCAAGAGACTTCGATTGGAGAATTTCATGTGCCATTCCAGCCACGAGACTGAGTTCGGAAACCACGTCAATTTCATCACTGGTCAAAATGGAAGTGGTAAGAGTGCAATCCTAACAGCGTTGTGTGTTGCATTTGGTTGTCGAGCCAAAGGGACTCAAAGGGCTTCCACTATGAAGGATTTCATTAAAACTGGTGCCAGCAATGCTGTCATTCATGTTGAAATTCAAAATGAAGGAGAGGATGCTTTTAAGCCTGAAATATATGGTGATGTTATCGTTGTAGAACGTAGGATATCTGAATCCACAAGCTCTACTATATTAAAAGACCAGCAAGGAAAGAAAGTCGGCAGTCGGAAAGCAGATCTCCAAGAAATTGTCGAACATTTTAATATTGATGTGGAGAATCCATGTGTAATTATGAGTCAAGACAAAAGCAGAGAATTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTTTTTTACAAGGCCACACTTCTTCAGCAAGTCAGTGATCTTCTGGAAAGCATTTGCAATGAAATAATGATTGCATATGGAATAGTTGAAGAATTAGAGGTTGCAATAAGGCCTATAGAAAAGGAGCTTAATGAGCTGCAAGTTAAAATTAAAGCTATGGAACATGTTGAACAAATATCCATACAGGTTCAGCAGTTAAAAAAGAAACTTGCATGGTCATGGGTTTATGATGTGGACAAGCAACTTGTAGAACAAAATGTAAAGATTGAAAAGCTGAAGAACCGGATACCTACCTGCCAAGCTAAGATTGAACAACAACTGCATCGGGTTGGAAAATTGAGGGAAAGCTGCTCCCAGAAGAAAGTTGAAATTGCAAGTATGTTGGAAACGACATCCCAAGTCAAGCAAGTGAAGGAAAATTTAAGCCAGTCCGTGTCCATGGCAACGAAAGAAGCATTCAAACTTGAGCGAGAATGCAAAGGTAAAATTAGCAACATACAGAAGATGGTACTTCAACTTAAAAAGCTTGAACAACAAGTGCAGGATATTCATGAGCAGTATACCAAAAATACTCAGGCTGAAGAATCTGACAATAAGGAGAAACTAAATGGGCTCCAAGATGCGGTTCTTGCAGCTGAGTTAGACCTGCAAAGTTTGAAAGAAGAGGAGGTTATGTTAACCAACAGCATACATAGGCAAAATGATGAAATCAAAAAGATTGCTGATAAGATGCAAGATCATGAAAATAAATATCGTGGTATCTCGAATCATATCCGTGATCTTCAACAACACCAAAGCAATAAGATTGCGGTTTTTGGAGGAGATAAAGTGATGAATCTTTTACAAAAAATTGAGAGATATCGTCTAAGGTTTAAGATGCCACCGATTGGTCCAATTGGTGCCCATCTGAAGTTGCTCAATGGTGATAAATGGGCGCTCGCCGTTGAACATGCCGTTGGGAGATTGCTCAATTCTTTTATAGTGACTGATCACCAGGATTTTCAACTTCTGAAACAATGTGCTAAGGAAGCAAACTATGGTCACCTTCAAATTATTATTTATGATTTTTCAATCCCAAGGTTGATAATACCACATCACATGCTTCCTGATACAAAACATCCATCAACTCTTTCCATCTTACAATCCGAGAATCAAACTGTGATTAATGTCTTAGTGGATCAGGGAAATGTTGAAAGACAAGTGCTTGTTAACGATTATGATGCTGGGAAAGTGGTTGCCTTTGAACAAAGGATCCGAAATCTGAAGGAGATATATACAGCAGATGGATATAGAATGTTTTCTCGAGGTTCAGTGCAGACTATTCTTCCCCGAAATAAGAAGCTAAGATCTGGCCGTCTCTGTAGTTCTTTTGAAGATCAGATTGAGAATCTTCGTAATGAAGCATCCGATGAGCAAAAGGCTGCCATTGACTGTAAAAGGAATAAAAGAGAGGCAGAGATCAAGATTGAAGATCTTGACAGGAATCTGAAATCTGTAAAGAGGCTTTGTGTAAATGCAGGAAGAAATTTTACTTCTAAGAAGCTAGCTTTGGAGGAGGCAATGCATCAGCATGCAGCAGAAAATACCTCAGCACCTTTGTCCTCTGTCGATGAGCTTGTTGAAGAAATTTCAGAAGTCCAGAAAAAAATAAAAGAAGAGCAAGTCTTATTGGAAGGCCTTCAGCAAAGGAGGGATGAAGCAGCAGGAGAAGCAAATGATCTTAAAGTAAAATTTGACAAACTGTGTGAATCAGCGAATGGGGAAATTGCCGCCCTTGAGAACACTGAGAATGAACTTGTGGAAATTGAAAGAGAAATGGATTTGGCAAAAAAGGCGAAGGATCATTATGATGGTGTCATGAAAAACAAGGTCCTTCTTGATATTAAGGTGGCAGAGGAACAATATCTGGAGCTTACGAAGAGGCGTGAGGAGAACATTAAAAAGGCTTCCATAATTTGCTGTCAGGATGAACTCGATTCATTAGGAGGTTGTGATGGGAACACCCCAGAGCAAATCAGTGTCCAATTAGAAAGACTAAACCAGACACTTAGGCGTGAGAGCCAAAGGTACTCTGAATCAATTGATGATCTTAGGATGCTATATGAGAAAAAAAAACGTAAGATTATAAAAAGACAGGAGGTTTACAAAGCACTTCGACAGAAATTGGATGCTTGCCACAGAGCCTTAGAGATACGAAGGAACAAGTTTAAGAGAAATGCAACTTACCTGAAGCATCAGCTTTCTTGGAAATTTAATGGCCATTTGAGAAAGAAGGGGATCAGTGGACTTATCAGAGTTAATTATGAGGAAAAAACCTTATTGGTTGAGGTACAGATGCCCCAAGATGCATCAAACAGAGCTGTGCGAGACACGAGGGGGCTTTCAGGTGGAGAGCGTTCTTTTTCAACATTGTGCTTTGCGTTAGCCCTTCATGAAATGACCGAAGCCCCTTTCAGAGCAATGGATGAATTTGATGTCTTTATGGATGCCGTAAGCCGGAAAATCAGCTTGGACACTCTGGTTGATTTTGCCGAGGCACAAGGATCCCAGTGGATATTCATCACACCGCATGATACTAGCTCGGTGAAGGCGGGGGACAGGATAAAGAAGATGCAAATGGCAGCTCCACGTTCTTGA 3174 0.4017 MGEPSSSRVYRTIQQPNAGIIKRLRLENFMCHSSHETEFGNHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASTMKDFIKTGASNAVIHVEIQNEGEDAFKPEIYGDVIVVERRISESTSSTILKDQQGKKVGSRKADLQEIVEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVSDLLESICNEIMIAYGIVEELEVAIRPIEKELNELQVKIKAMEHVEQISIQVQQLKKKLAWSWVYDVDKQLVEQNVKIEKLKNRIPTCQAKIEQQLHRVGKLRESCSQKKVEIASMLETTSQVKQVKENLSQSVSMATKEAFKLERECKGKISNIQKMVLQLKKLEQQVQDIHEQYTKNTQAEESDNKEKLNGLQDAVLAAELDLQSLKEEEVMLTNSIHRQNDEIKKIADKMQDHENKYRGISNHIRDLQQHQSNKIAVFGGDKVMNLLQKIERYRLRFKMPPIGPIGAHLKLLNGDKWALAVEHAVGRLLNSFIVTDHQDFQLLKQCAKEANYGHLQIIIYDFSIPRLIIPHHMLPDTKHPSTLSILQSENQTVINVLVDQGNVERQVLVNDYDAGKVVAFEQRIRNLKEIYTADGYRMFSRGSVQTILPRNKKLRSGRLCSSFEDQIENLRNEASDEQKAAIDCKRNKREAEIKIEDLDRNLKSVKRLCVNAGRNFTSKKLALEEAMHQHAAENTSAPLSSVDELVEEISEVQKKIKEEQVLLEGLQQRRDEAAGEANDLKVKFDKLCESANGEIAALENTENELVEIEREMDLAKKAKDHYDGVMKNKVLLDIKVAEEQYLELTKRREENIKKASIICCQDELDSLGGCDGNTPEQISVQLERLNQTLRRESQRYSESIDDLRMLYEKKKRKIIKRQEVYKALRQKLDACHRALEIRRNKFKRNATYLKHQLSWKFNGHLRKKGISGLIRVNYEEKTLLVEVQMPQDASNRAVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAQGSQWIFITPHDTSSVKAGDRIKKMQMAAPRS 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00153 1057 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 15 1056 - -
Gabi102g00153 1057 Coils Coil 715 756 - -
Gabi102g00153 1057 Coils Coil 764 791 - -
Gabi102g00153 1057 SUPERFAMILY Smc hinge domain 428 615 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Gabi102g00153 1057 Coils Coil 633 681 - -
Gabi102g00153 1057 Coils Coil 345 372 - -
Gabi102g00153 1057 Coils Coil 807 827 - -
Gabi102g00153 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 1050 IPR027417 -
Gabi102g00153 1057 Coils Coil 855 875 - -
Gabi102g00153 1057 Coils Coil 381 443 - -
Gabi102g00153 1057 Gene3D - 735 1054 IPR027417 -
Gabi102g00153 1057 Coils Coil 208 228 - -
Gabi102g00153 1057 Coils Coil 317 337 - -
Gabi102g00153 1057 Pfam RecF/RecN/SMC N terminal domain 21 1052 IPR003395 -
Gabi102g00153 1057 Gene3D - 20 235 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00153 14 1057 Structural Maintenance of Chromosomes family AT5G07660 58.238 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00153 K22804 - gmx:100816916 1624.37