Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00147 ATGAACAACCACGGATTTTATGGCTACCTTGGAGTTGCAACTACTTTGGTGGTTTTGTTGGGTCTATTTCAAGGCACTTCAGGGCTAACACAAGCTGAGGCACTTCTCAAGTGGAAACAAAGTCTCCCTAACCAACCAATTTTGAATTCATGGGTGTCTCCAACACAGAACAACTCAAGTGCAACTCAAACCCCATGTTCATGGAGAGGTATTACTTGTGATTCTCAAGGCAGTGTGATTATAATAAACTTGGCATACACTGGACTTGAAGGTACCCTTCAAAACTTGAACTTTTCTGTTTTCCCAAACCTTCTCCGTCTTGATCTCAAAGTAAACAATCTCACTGGCACTATACCAGAAAACATTGGTGTGCTCTCAAAACTCCAATTTCTTGATCTTTCCACTAATTATCTCAATGGTACTTTACCTCTTTCTATTTCCAATCTGACTCAAGTTTCTGAGCTTGATTGTTCAAGAAATGATATAACAGGAATATTAGACCCTAGCTTATTTCCTGATGGAACTGATAAGCCAAAAACTGGTCTCATTAGTATCAGGAATCTCCTATTCCAAGACACCCTCTTAGGTGGTAGAATTCCAAATGAAATAGGGAACATAAGAAACTTGACAGTGCTAGCTATTGATGGGAACAACTTTTATGGGCCTATTCCTCCATCTCTTGGAAACTGTACACAATTAAGCATTCTTAGAATGCCTCAAAACCAACTCACAGGCACAATACCCCCAGGTATTGGTATGTTAACCAATCTAACTGATCTTCGCTTATTCACCAACAACTTGACTGGTACGGTGCCACAAGAATTTGGAAACCTGTCTTCCTTGATTACGCTGCATCTTGCTGAGAACAACTTTAGTGGTGAATTGCCACCACAAGTGTGCAAAAGTGGCACTCTTGTCAATTTCAGTGCAGCCTTCAATAGTTTCACTGGTCCAATTCCAATAAGCCTTAGAAACTGCCCAGCCTTATATAGAGTTCGACTTGAATACAACCAGCTCACAGGTTATGCAGATCAGGATTTTGGAGTATATCCTAACCTCACTTACATGGACTTCAGCTATAACAGGGTCCAAGGTGAGCTCTCAGCAAATTGGGGTGCCTGCAATAACTTGCAATTACTCAGAATGGCTGGGAATGCAGTGAGTGGAAACATTCCAGGGGAGATTTTTCAGTTGGACCAACTACAAGAGCTTGACCTTTCCTCCAACCAAATATCAGGAGACATTCCTCCACAGATAGGAAATTCCTCCATCCTTTATGATTTGAATTTGAGTGGCAACAAACTTTCTGGTGAGGTGCCATCAGAAATTGGAAACCTTTCTAATTTGAGGAATTTAGACTTGTCAATGAACATGTTATTGGGGCCAATACCAAATCAAATAGGGGACTGCTCAAACTTGCAGAGTTTAAATTTGAGCAACAATGGCTTGAATGGCACAATTCCCTTCCAAATTGGAAATCTTGCAGCCTTACAAGATTTTTTGGACTTGAGTTACAATTCACTCTCAGGAGGAATTCCTGCTAATCTTGGTAAGCTTTCAAATTTGATAAGCTTGAATATCTCTCACAACAATCTTTCAGGTACCATACCTGATTCCCTTAGTGAAATGTTGAGCTTGTCAGCCATCAACCTCTCCTACAATCAATTGGAGGGCCCTGTTCCTAAAGGTGGCATTTTCAACTCTTCTCAACCTCTGGATTTGAGCAACAACAGAGATTTATGCGGGAATATCCAAGGTTTGCAACCTTGTAATGCCTCTCTTACTGAACCTGATGGAAAAAGTAACAAAAACAAGGTTGTGATCCCCCTTGTTGCTTCTTTGGGAGGTGCCCTTTTTCTTTCATTGGTGTTAGTTGGGATTCTTTTCTTTTTCAACAAGAGAAAGTCAATAGCTTCAAGACAAAAACCTTCATTCAAGAGACCAAACCCATTTTCAGTTTGGTACTTCAATGGTAGAGTGGTGTATGGAGACATAATGGAAGCAACCGAGAACTTTGATGACCAGTATTGCATTGGGGAGGGAGCACTGGGAAAAGTTTACAAAGCAGTGATGCGAGGGGGTCAAATATTTGCTGTAAAAAAGTTGAAATGTGATGAAGACAGCTTAGACATTGAGAGCATAAAAGCCTTTGAGAGTGAGATAGAAGCCATGTCAGAAACACGCCACAGAAACATTGTGAAGCTTTACGGATTTTGCTCTGAAGGGTTGCACACATTTTTAATTTATGAGTATATGGATAGAGGGAACTTATCTTATATGCTAGGAAATGAAAAGGAAGCATTAGAACTAGATTGGCCTCACAGGGTTGATATTATCAAAGGTGTAGCAAGCGCTTTGTCCTATATGCATCATGATTGTGCACCACCTTTAATTCATAGAGACATATCAAGCAAGAATGTTTTGTTGTCCTCCAATCTTGAAGCTCATGTCTCAGATTTTGGCACTGCAAGGTTTCTGAAGCATGATTCGCCTATTTGGACATCATTTGCTGGCACATATGGCTATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAAAAATGTGATGTGTTCAGTTTTGGTGTTTTGGCATTTGAGGTTCTTACGGGAAAGCACCCTGGTGATCTTGTTTCCTATATACAAACTTCTAATGATGAGAAGATAAACTTCAAAGAGATTTTAGACCCGCGCCTCTCACCTCCTGCAAAGAACAATATTTTGAAGCAATTGTCATTGATTGCGAATCTAGCACTTTCATGTTTGCAAACAAATCCTCAATCTAGACCAACCATGCGAAGCATAGCTCAGATGCTTGAAATGGAGATTTCAAATAACTCATATGGTTGA 2853 0.4038 MNNHGFYGYLGVATTLVVLLGLFQGTSGLTQAEALLKWKQSLPNQPILNSWVSPTQNNSSATQTPCSWRGITCDSQGSVIIINLAYTGLEGTLQNLNFSVFPNLLRLDLKVNNLTGTIPENIGVLSKLQFLDLSTNYLNGTLPLSISNLTQVSELDCSRNDITGILDPSLFPDGTDKPKTGLISIRNLLFQDTLLGGRIPNEIGNIRNLTVLAIDGNNFYGPIPPSLGNCTQLSILRMPQNQLTGTIPPGIGMLTNLTDLRLFTNNLTGTVPQEFGNLSSLITLHLAENNFSGELPPQVCKSGTLVNFSAAFNSFTGPIPISLRNCPALYRVRLEYNQLTGYADQDFGVYPNLTYMDFSYNRVQGELSANWGACNNLQLLRMAGNAVSGNIPGEIFQLDQLQELDLSSNQISGDIPPQIGNSSILYDLNLSGNKLSGEVPSEIGNLSNLRNLDLSMNMLLGPIPNQIGDCSNLQSLNLSNNGLNGTIPFQIGNLAALQDFLDLSYNSLSGGIPANLGKLSNLISLNISHNNLSGTIPDSLSEMLSLSAINLSYNQLEGPVPKGGIFNSSQPLDLSNNRDLCGNIQGLQPCNASLTEPDGKSNKNKVVIPLVASLGGALFLSLVLVGILFFFNKRKSIASRQKPSFKRPNPFSVWYFNGRVVYGDIMEATENFDDQYCIGEGALGKVYKAVMRGGQIFAVKKLKCDEDSLDIESIKAFESEIEAMSETRHRNIVKLYGFCSEGLHTFLIYEYMDRGNLSYMLGNEKEALELDWPHRVDIIKGVASALSYMHHDCAPPLIHRDISSKNVLLSSNLEAHVSDFGTARFLKHDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEVLTGKHPGDLVSYIQTSNDEKINFKEILDPRLSPPAKNNILKQLSLIANLALSCLQTNPQSRPTMRSIAQMLEMEISNNSYG 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00147 950 Gene3D Ribonuclease Inhibitor 27 109 IPR032675 -
Gabi102g00147 950 Gene3D Ribonuclease Inhibitor 304 596 IPR032675 -
Gabi102g00147 950 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 271 - -
Gabi102g00147 950 SMART LRR_typ_2 519 543 IPR003591 -
Gabi102g00147 950 SMART LRR_typ_2 446 470 IPR003591 -
Gabi102g00147 950 SMART LRR_typ_2 254 277 IPR003591 -
Gabi102g00147 950 SMART LRR_typ_2 398 422 IPR003591 -
Gabi102g00147 950 SMART LRR_typ_2 125 149 IPR003591 -
Gabi102g00147 950 SMART LRR_typ_2 278 302 IPR003591 -
Gabi102g00147 950 ProSitePatterns Tyrosine protein kinases specific active-site signature. 797 809 IPR008266 GO:0004672|GO:0006468
Gabi102g00147 950 PANTHER LEUCINE RICH REPEAT KINASE 2 190 945 - -
Gabi102g00147 950 ProSiteProfiles Protein kinase domain profile. 672 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi102g00147 950 ProSiteProfiles Leucine-rich repeat profile. 400 422 IPR001611 GO:0005515
Gabi102g00147 950 Pfam Leucine rich repeat N-terminal domain 30 74 IPR013210 -
Gabi102g00147 950 Pfam Protein kinase domain 677 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi102g00147 950 Gene3D Ribonuclease Inhibitor 174 303 IPR032675 -
Gabi102g00147 950 FunFam Nuclear pore complex protein NUP107 29 172 - -
Gabi102g00147 950 SUPERFAMILY L domain-like 372 582 - -
Gabi102g00147 950 Gene3D Ribonuclease Inhibitor 110 173 IPR032675 -
Gabi102g00147 950 Gene3D Transferase(Phosphotransferase) domain 1 752 948 - -
Gabi102g00147 950 SUPERFAMILY L domain-like 54 435 - -
Gabi102g00147 950 SUPERFAMILY Protein kinase-like (PK-like) 646 942 IPR011009 -
Gabi102g00147 950 Pfam Leucine rich repeat 501 556 IPR001611 GO:0005515
Gabi102g00147 950 FunFam Leucine-rich repeat receptor protein kinase MSP1 634 751 - -
Gabi102g00147 950 FunFam Leucine-rich repeat receptor-like protein kinase TDR 275 592 - -
Gabi102g00147 950 Gene3D Phosphorylase Kinase; domain 1 636 751 - -
Gabi102g00147 950 FunFam MDIS1-interacting receptor like kinase 2 752 946 - -
Gabi102g00147 950 SMART serkin_6 672 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00147 Gabi-Chr102 1301037 1304428 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00147 17 845 Receptor kinase-like Gene Family AT4G08850 40.000 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gabi102g00147 Pkinase 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00147 - - aprc:113866080 1540.78