Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00128 ATGGAGGAAGTCCAAGAGCCTCAAACCCAATCACCACTCGGTCAAGAAGATGAGAATGAAGTGATTACTGAAAGCTCTGCATTTGTTAAAGGGGAGCCAACACAAGAATTTAGTTACCCTCCAAAAGTTGATTCTCAAGTTGAAGTCCTTCACGAGAAGGTCACTAAACAAATAATTAAGGAAGGCCATGGCCAGAAACCTACCAAATATTCAACTTGCTTCTTCCATTACAGGGCGTGGTCTGAGAGTACACAGCACAAGTTTGAAGACACATGGGAGGAGCAACGACCAATTGAGATGGTATTAGGAAAAGAGAAGAAAGAAATGACTGGGTTGGGCATTGGTGTGGCAAACATGAAAGCGGGTGAGCGTGCGTTGCTGCGTGTTGGCTGGGAACTAGGATATGGAAAAGAAGGAAGCTTTTCTTTTCCAAATGTTCCACCCATGGCAGATTTAGTTTATGAAGTTGAGTTCATTGGCTTTGATGAAACAAAAGAAGGAAAAGCTCGCAGTGATATGACGGTGGAGGAAAGGATCGGTGCAGCAGATCGGAGAAAGATGGATGGAAATGCTATGTTTCAGGAAGAAAAACTAGAGGAGGCCATGCAACAGTATGAAATGGCCATAGCGTATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAATATAGGGATATGGCTCTGGCTGTAAAGAATCCATGCCATCTTAACATGGCAGCATGTCTGATTAAGCTGAACCGCTATGAAGAAGCTATTGGACAATGCAGCATTGTACTGAGTGAGGATGAGAACAATGTCAAGGCATTATTTAGGCGAGGTAAGGCTAGAGCATCACTTGGGCAAACAGATGCTGCCAGAGAAGATTTTCAAAAGGCACGTAAACATGCCCCTGAAGATAAAGCAATTGCAAGAGAATTGAGGTTGCTTGCTGAACATGACAAGGCTATTTACCAAAAGCAGAAAGAGATCTATAAAGGAATATTTGGACCAAGTCCTCAACCAAAACCTAAGCCAAGTAATTGGCTGGTTCTTATTTGGCAGTGGTTGCTTTCAGTATTTTATGGCCTTATCACACTCTTCAAGCGTGAAAGGCACAAATCTGACTAA 1110 0.4288 MEEVQEPQTQSPLGQEDENEVITESSAFVKGEPTQEFSYPPKVDSQVEVLHEKVTKQIIKEGHGQKPTKYSTCFFHYRAWSESTQHKFEDTWEEQRPIEMVLGKEKKEMTGLGIGVANMKAGERALLRVGWELGYGKEGSFSFPNVPPMADLVYEVEFIGFDETKEGKARSDMTVEERIGAADRRKMDGNAMFQEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCSIVLSEDENNVKALFRRGKARASLGQTDAAREDFQKARKHAPEDKAIARELRLLAEHDKAIYQKQKEIYKGIFGPSPQPKPKPSNWLVLIWQWLLSVFYGLITLFKRERHKSD 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00128 369 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 97 340 IPR039663 -
Gabi102g00128 369 MobiDBLite consensus disorder prediction 1 22 - -
Gabi102g00128 369 Gene3D - 38 163 IPR046357 GO:0003755
Gabi102g00128 369 Gene3D Tetratricopeptide repeat domain 164 295 IPR011990 GO:0005515
Gabi102g00128 369 FunFam Peptidylprolyl isomerase 167 295 - -
Gabi102g00128 369 SMART tpr_5 233 266 IPR019734 GO:0005515
Gabi102g00128 369 SMART tpr_5 182 215 IPR019734 GO:0005515
Gabi102g00128 369 SMART tpr_5 267 300 IPR019734 GO:0005515
Gabi102g00128 369 Pfam Tetratricopeptide repeat 268 300 IPR013105 -
Gabi102g00128 369 SUPERFAMILY TPR-like 174 326 IPR011990 GO:0005515
Gabi102g00128 369 Coils Coil 184 204 - -
Gabi102g00128 369 SUPERFAMILY FKBP-like 32 168 - -
Gabi102g00128 369 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 66 159 IPR001179 GO:0003755
Gabi102g00128 369 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 70 162 IPR001179 GO:0003755
Gabi102g00128 369 ProSiteProfiles TPR repeat profile. 267 300 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00128 Gabi-Chr102 1145043 1148629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00128 53 330 Calmodulin-binding Proteins AT3G25230 32.028 1.14e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00128 - - gmx:100790587 687.952