Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00124 ATGAAGAGATTGAGGTCCAGCGAGGATCTGCACTCGTACGGTGACAAGAATGCTAGCAAGGATTCGAATCTGAACCGTTCGTTTTCTTCATCTGCGCAGCGAAGCTTTTATTATAAGCCTGAGAATGGGCGCAAGGGTTTGCTCCCTTCCTCATCGTCCCGCTACGATAGAGATCGGACGGTGGATGAGGATCGGGAGGGTTCGAGGTTGGTTCGGAAGCGATCCGAACATGATTTCGAGGGTTTTGATCGGAGGAAGGGGTTTGATCGGTATAGGGACAGTGGTTATGGTGGTGGAGGAGGGGATAGGAATTTGATTCACCGGTCGGAGAGTTTCTGTGGTTCGAGGAGGGATTTTCCGAAGGGTTTCCGGTCGGAGAGGGACCGGTCGCGAAGGGAGGGTAGCGTGTCGTCGTGGCGTAGAGGATTGAAGGATTTCGATGAGAGTGGTAGAGGGAGTAGAGTTGGGGTGGAGGAGAGAGTAGTGCGGTCACCCAAGGGCTTGAGGGATGTGAAGTCTCCTACGTGGTCAAAGGATTCTGAGAGTGAGCAATCTAAGAAGAGATCCTCTTCTCCAAGAGGGTTTAGAGATGCCAAGTCCAAGTCAAAGTCACCCACTTGGTCTAAGGATTCCGAGAGTGAGCAGTCCAAGAGTGAGCAATCCAAGAGTGTTGAGGTGAAGAAAACTGAGGAGTTGCAAGTTCAGAGTGGAAACACTAGTGAAATGGAAGAAGGGGAGCTGGAACCTGAACCCCTGCCTCAAACTGAACCCGAAGCTGCTCCTCCCAAAGATGAAGATGGTCCTGGAAGTGAAGACCAGCCCTCTGTTCCTTTGGAAACTGATGACAAGAAAGTTCAGAATGAATGCCAGCTCAATGACACAGATACTGCAATGGCCGAAAGACAGGAATCGTCAAGTATGCAAGATGTAAAACCTAATGAGGACGTTGATTCTGAGGTAAAAGATGCAGGAAAAGAAGCTGATAAGCTGCCAGATATTCAAGATGATCCACCCAAGAAAATGCTTGTTACTGAGACCGAACATGACACAGTGGGTAATGTTGATGATAAGAAAGACGAGTGTTTGAAAGCTGATACTGAGTGCAAGTTGGAAACAAAGGAGGCAGCAGATATGGAGAAGCCATTGTTTGATGAGGAGGAGCATAAGCAGGACAAGGGTGTAGATCTGGAAACTAGCGCAGGTGTTGACAAACCTGAGTTAAATTATGAAGTCTCAACAGAATATGAAGTTCCCAAAGAGGTAAGTAGTGAAATGATGATGGAGAATGTGGCCAACAATGCAAAGGATAAAGGCAAAAGAGTCTCTGTTGCACTTACTGATGTTGCTCATTCTTCAGAAGAGGGCTTATGGATTGATAGAGGATCAAGAGATCTCACAACAAGCTCTGCTGATGTTATGGAAACTCCAAGCACAAGGGGATTTGAGTTGTTTTCCAGATCTCCTGTTAGAAAAGTGGAGAAATCAGACCACTCGATTCTCAACAAGCAGAAGGATGACAGTCTTGGGATGGAACAGCTTGATCTTACTCTTAGCTTGCCAAATGTTCTGTTACCTATTGGTGCTCAGGAGACAACAACACAAGTTCCTGGATCCCCCAGTCAAGCACGGAGCGTGCAGTCATTAAGTAATACATTTTGTACTAACTCAGATGGTTTCACTGCATCAATGTCCTTTTCAGGTTCCCAATCATTCCATCATAATCCAAGTTGTTCTCTAACAAAAAATTCGGTGGACTATGAACAATCTGTTGGCAGTCGCCCCTTATTCCAGGGAATAGATCAAGTTTCTCAAGTATGTTGGCAAGGCCAGTCTCAGAGTGAACCCAAACAGAAAGAAGTTCCTTTTGGTCAGAGAACTTTGATGAACGGAAATGGCTCTTTGTACCAGTCTCAAGCATCATGGGGAGTTTTAGATGGTCAAGCTGTGAAAGGTCATAATCCTAGGGTTCTAGAAGGGAGCTCGAAAATGGGCAGTGGGCTTGAAAGGCAATTGAGTTTTCATAAGCAGGTTTCTGGACAGTCAAGACGCCATGAAGATGTAAGATCTCCTTCACAGAGTGTTGGGTCTCACGACATTGGATCAAATCATAGTTTTGAGAAAAAGAGGGAAGTTAGAGACAGGAGTAGTGGTAGTCTGTATCGAACTACCAGCCAGAAGGAACAAGAACAACTTCTGATGGATGGTGTTGATTTTGTTGAGACAATCATTGCAAGAATAGTTTCTGACCCTGTGCATGCAATGTCAAGAAAGTTCCATGAAATGACCGGACAGTCCATAGCATGTCTGAAGGAGGGTATTCGAGAAATCATGCTCAATGCACATAAGCATGGGCAGATACTTGCTTTTCAAAAAGTTCTACAGAACAGGTCTGATATAACCTTGGATGACCTACTGAAGTGCCACCGAGTGCAACTGGAAATTTTAGTTGCTTTAAAAACCTGTTTAACTCATTTTCTTCACCTGGACAACAGCATTTCATCTTCTGATTTAGCTCAAGTTTTTCTGAACTTAAGATGTAGGAATCTTTCATGTCTAAGTCAGTTGCCAGTGGACGAATGTGATTGCAAGGTTTGTGTGCAGAAGAATGGTTTTTGCAGGGAATGCATGTGTCTTGTGTGTTCTAAGTTTGATAATGCGTCAAACACATGTAGTTGGGTTGGGTGTGATGTTTGCCTTCACTGGTGCCATACTGAATGTGGATTACGGGAATCTTATATTAGAAATGGGCATAGTTCTACTGGGACGAAAGGGATGACTGAGATGCAGTTTCACTGTATTGCTTGTGATCATCCTTCTGAGATGTTTGGTTTTGTCAAGGAGGTGTTTCAAAATTTTGCAAAAGATTGGTCAGTTGAAACTCTTTGCAAGGAACTTGAATATGTGAAGAGAATATTTTTTGCCAGCAAGGATATGAGAGGGAGACAGCTGCATGACATTGCAGATCAAATGCTGCTAAGGTTGTTGAATAAGTCTAATCATCCTGAGGTTTTGAGGCACATCATGTCTTTTCTTTCTGATGGTGATTCTGCCAAATTAGCCTTGACAACAAAGTTTTCTGGGAAGGAACAAATTAAAGAAAACAATGGAGTAGCTGGACCCAGCCAGGAAGCTGCTTGGCTGAAAACTATTTATTCAGAGAAACCACCTCTGTTAGAAAGGCCTGCAAACATCCTTCCTACCTTTGACCAGAATGATAAAAGGACTCTGGCGCAAGAGTTGCAGATGAGTAGGGTCCAAAAGGACTTTGGTTTTGATGAATTGGAGAGTGTAGTAAAAATTAAACAGGCAGAGGCTAAAATGTTTCAGTCACGTGCTGATGATGCTAGAAGAGAAGCTGAAGGGTTGAAACGCATTGCCGTTGCAAAGAATGAGAAAATTGAAGAAGAGTATACTAATCGAATTGCCAAGTTGCGGTTGACTGAGACTGAGGAAATGCGTAAACAAAAAATTGAAGAGCTCCAAGCATTAGATAGGGCACATATGGAGTATTTGAACATGAAAAAAAGAATGGAGAGAGACATTGAAGATCTGTTGTCTAAAATGGAAGCTGCTAAAATGAGCCTTGCAATGTGA 3594 0.4374 MKRLRSSEDLHSYGDKNASKDSNLNRSFSSSAQRSFYYKPENGRKGLLPSSSSRYDRDRTVDEDREGSRLVRKRSEHDFEGFDRRKGFDRYRDSGYGGGGGDRNLIHRSESFCGSRRDFPKGFRSERDRSRREGSVSSWRRGLKDFDESGRGSRVGVEERVVRSPKGLRDVKSPTWSKDSESEQSKKRSSSPRGFRDAKSKSKSPTWSKDSESEQSKSEQSKSVEVKKTEELQVQSGNTSEMEEGELEPEPLPQTEPEAAPPKDEDGPGSEDQPSVPLETDDKKVQNECQLNDTDTAMAERQESSSMQDVKPNEDVDSEVKDAGKEADKLPDIQDDPPKKMLVTETEHDTVGNVDDKKDECLKADTECKLETKEAADMEKPLFDEEEHKQDKGVDLETSAGVDKPELNYEVSTEYEVPKEVSSEMMMENVANNAKDKGKRVSVALTDVAHSSEEGLWIDRGSRDLTTSSADVMETPSTRGFELFSRSPVRKVEKSDHSILNKQKDDSLGMEQLDLTLSLPNVLLPIGAQETTTQVPGSPSQARSVQSLSNTFCTNSDGFTASMSFSGSQSFHHNPSCSLTKNSVDYEQSVGSRPLFQGIDQVSQVCWQGQSQSEPKQKEVPFGQRTLMNGNGSLYQSQASWGVLDGQAVKGHNPRVLEGSSKMGSGLERQLSFHKQVSGQSRRHEDVRSPSQSVGSHDIGSNHSFEKKREVRDRSSGSLYRTTSQKEQEQLLMDGVDFVETIIARIVSDPVHAMSRKFHEMTGQSIACLKEGIREIMLNAHKHGQILAFQKVLQNRSDITLDDLLKCHRVQLEILVALKTCLTHFLHLDNSISSSDLAQVFLNLRCRNLSCLSQLPVDECDCKVCVQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTECGLRESYIRNGHSSTGTKGMTEMQFHCIACDHPSEMFGFVKEVFQNFAKDWSVETLCKELEYVKRIFFASKDMRGRQLHDIADQMLLRLLNKSNHPEVLRHIMSFLSDGDSAKLALTTKFSGKEQIKENNGVAGPSQEAAWLKTIYSEKPPLLERPANILPTFDQNDKRTLAQELQMSRVQKDFGFDELESVVKIKQAEAKMFQSRADDARREAEGLKRIAVAKNEKIEEEYTNRIAKLRLTETEEMRKQKIEELQALDRAHMEYLNMKKRMERDIEDLLSKMEAAKMSLAM 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 290 306 - -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 673 724 - -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 307 353 - -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 377 399 - -
Gabi102g00124 1197 Pfam Coiled-coil region of Oberon 1069 1185 IPR032535 -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 259 289 - -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 377 413 - -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 17 37 - -
Gabi102g00124 1197 Coils Coil 1098 1136 - -
Gabi102g00124 1197 Coils Coil 1146 1194 - -
Gabi102g00124 1197 CDD PHD_OBE1_like 876 935 IPR047578 -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 1 353 - -
Gabi102g00124 1197 Pfam PHD - plant homeodomain finger protein 846 969 IPR032881 -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 701 716 - -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 1 16 - -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 51 92 - -
Gabi102g00124 1197 MobiDBLite consensus disorder prediction 109 229 - -
Gabi102g00124 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 757 779 IPR004082 -
Gabi102g00124 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 811 826 IPR004082 -
Gabi102g00124 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 883 903 IPR004082 -
Gabi102g00124 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 956 975 IPR004082 -
Gabi102g00124 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 837 858 IPR004082 -
Gabi102g00124 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 796 811 IPR004082 -
Gabi102g00124 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1092 1112 IPR004082 -
Gabi102g00124 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1131 1153 IPR004082 -
Gabi102g00124 1197 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1194 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00124 Gabi-Chr102 1131637 1136627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00124 846 994 PHD Gene Family AT5G57380 27.517 3.91e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00124 - - gmx:100817003 1743.01