Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00102 ATGGGGTACCTCAACATGTCTTGCAGAGCTGAATCCGCAGTTTCAACAAACAATTCTCTCTCTTCTTCAAAAGAGAAAGAGAAAGAGAAAGAGAAGCCTATCAAGATCCAACAGTTCCAATACAGTGACCTTGAAGCTGCCACCAATGGCTTCTCTGACCGCAAGCTTCTCGGCAAAGGAAGCCATGGCTATGTCTACAAAGCCGTTGTTCGTGGCCGTCCTGTTGCGGTGAAGAGACCATCTAGACCTCACTCTCTTCTTCACAGACCCATCTCTTCTTCTTCTTCTTCATCCGCACCTGAGATCAACAACGAGGTTGACAACGAGATCGACATCTTGTCCAAAATTCAGAGCCCGAGATTGGTGAATTTGGTGGGTTTCTCGAATGATTCAAAAGACAGGCTTTTGGTTGTGGAATTCATGTGCAATGGTACCCTTTATGATGTTCTTCATTCTTCTGCTAGACCACCCAATTGGGGTAGGAGAATTCGTTTGGCTTTGCAAACTGCAAAGGCCATTGATACCCTTCATTCCTCAACCCCACCTGTGATTCATAGAGATATAAAGTCTGCAAATGTTCTCATTGACCGCAACTTCAATGCCAGGTTAGGTGATTTTGGTTTGGCTCTAAGGGGCCATGTGGATGACTATAGACTCAGGTCCACTCCACCTGCTGGCACTATGGGTTATCTTGATCCTTGTTATGTGACTCCTAAAAATTTGAGCACAAAGACTGATGTTTTTAGCTTTGGGATTTTGTTGTTGGAGATTATAAGTGGAAGGAAGGCAATTGATATAACATATTCACCACCATCTATTGTGGATTGGGCTATTCCTCTTATAAAGAAAGGGAAGTTGCTGGCTGTTTATGATCCCAGAATAGCACCTCCTAAGGATCCGGTTGTGAGGAAGCAGTTTGCACTGATTGCAGCAAAATGTGTGAGGTCTTGCAGGGAGAGAAGGCCTTCCATGAATGATATTGTTAATTGGCTTTGTGGGTTGTGTAAATTGGTGCCTCTTCATTCATGGAATGGTTTTAATAATCCTTGCATGATGGTTGAGACTGTGGGACGCCCAGTTGAAGCAAGAAATGGCCAATTCAGTTCAAGACTGGAAGGCGTGGAAGATGCTTTGGATGCCAAATTGTCAAAATCTGCAATGAGATATTCACGGAGAGTGTATTCTGATTTGGGGTTTAGCAGCAATTTGATGGACCTTATGTCTAACACTGAGGAGCCTGAATTTCTAAGAGATGCTGATGGAGTGGAACATGGTTCTAAATCGGCTGAACAAGTTTCTAGCTCAAGGTTTGGCAGTGGAAGATATTTCAGAACTGGTAGGAATCTTTACCGGCCTTGTGGTACTGATAAGGATGCATTTGGTTTGAGTAAAGTCCAAATTGTTGGTGAAACTTCAAAACAGGATGTGGTTTCTGGTTCAAATTTGAATTCTCTGGCAGCTGAGGTTATCTAA 1473 0.4331 MGYLNMSCRAESAVSTNNSLSSSKEKEKEKEKPIKIQQFQYSDLEAATNGFSDRKLLGKGSHGYVYKAVVRGRPVAVKRPSRPHSLLHRPISSSSSSSAPEINNEVDNEIDILSKIQSPRLVNLVGFSNDSKDRLLVVEFMCNGTLYDVLHSSARPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALRGHVDDYRLRSTPPAGTMGYLDPCYVTPKNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPRIAPPKDPVVRKQFALIAAKCVRSCRERRPSMNDIVNWLCGLCKLVPLHSWNGFNNPCMMVETVGRPVEARNGQFSSRLEGVEDALDAKLSKSAMRYSRRVYSDLGFSSNLMDLMSNTEEPEFLRDADGVEHGSKSAEQVSSSRFGSGRYFRTGRNLYRPCGTDKDAFGLSKVQIVGETSKQDVVSGSNLNSLAAEVI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00102 490 PANTHER OS01G0253100 PROTEIN 17 333 - -
Gabi102g00102 490 FunFam Serine/threonine-protein kinase-like protein 141 344 - -
Gabi102g00102 490 MobiDBLite consensus disorder prediction 87 102 - -
Gabi102g00102 490 Gene3D Phosphorylase Kinase; domain 1 20 140 - -
Gabi102g00102 490 SUPERFAMILY Protein kinase-like (PK-like) 29 331 IPR011009 -
Gabi102g00102 490 Pfam Protein kinase domain 52 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi102g00102 490 SMART serkin_6 51 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi102g00102 490 Gene3D Transferase(Phosphotransferase) domain 1 141 339 - -
Gabi102g00102 490 FunFam Serine/threonine-protein kinase-like protein At1g28390 21 140 - -
Gabi102g00102 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Gabi102g00102 490 ProSitePatterns Protein kinases ATP-binding region signature. 57 78 IPR017441 GO:0005524
Gabi102g00102 490 ProSiteProfiles Protein kinase domain profile. 51 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi102g00102 490 MobiDBLite consensus disorder prediction 79 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00102 Gabi-Chr102 892581 894541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00102 29 331 Receptor kinase-like Gene Family AT3G59420 43.366 1.51e-73 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gabi102g00102 Pkinase 9.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00102 - - vum:124832395 809.675