Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00097 ATGGTTGTTGATATGCTAGGTTCATTCGTCTCTGCCTTCCTGCAAGTTCTGTTGGATAGGATAGCTGGTCATGAGCTTATAGACTTCTTCCGGGGCAACCATCTTGATGAGGCACTTCTTGTGAAGTTGAAGATGCTTTTGCTATCCGTCACTACAGTGATTAGTGACGCTGAGGAGAAACAGTTTATTGATCCCTTGGTGAAAGAGTGGGTTGATAGGCTTAAAAATGCTGCCTACGATGCTGATGATGTCTTGGATGAGATTGCCACTAAAGCCATGCAAGACAAGATGGATTCTGGTTTTCACACCACCTTAGATCAGGTAAGAGATTATGCTTCTTCTCTCAATCCCTTTGCTGAACGAGTTAAATCAAAAGTTGATAGGATTGTTGAGAGGTTGAAATCTATAATAGAGCATAAAGATCTTCTTGGTCTTAAGGAAAATGGTGTTGATAAATCACTCCATTTAGCTTCAGCCACAACTTCTTTGGTGGATGAACATCGAGTGTATGGCAGAAGTGGTGATAGGGAGAAGATAATTGATTTTCTGTTATCAGGCAACTCAAATGAAGAAGGGGTTCCTGTGGTTGCAATTGTTGGGATGGGAGGGGTAGGTAAGACTACTCTTGCTCAGCTTTTGTACAATGATGTGAGGGTGAGGAACCATTTTCAATCAAGATCATGGACCTCCGTTTCAGAGACATTGAACGTGTATGAAATAACCAAAAAAGTTTTTGAGTCATTTACTTTGTGGTATTCTAATATCTCAGACTTGAATGTACTCCAAATCAAGCTCAAGGATAGATTTACAAGACAGAGGTTTCTACTTGTTTTGGATGGATTTCAGAATGAGAACTTTCTTGACTGGGACATCCTCCAAAGGCCCTTTCTATCAGGAACCAGCGGAAGTAGAATTGTTGTCACCACACGTAGTCAAAGTGTTGCAACGGCAATTCGTGTTGATTTAACTCATTCCCTCTCGCTTCTGTCTCATGAAGATACATGGAAGTTATTCTCAAGTCATGCATTCAAATCAGGAAACCCGGATGAACATCCTGTCTTGACACAAATTGGCAAGAAAATAGTAAAGAAGTGCAATGGTCTCCCTCTAGCTGCAAAAACACTAGGGAGTCTCCTACGTTCTAAAGAGGATGCTGAGGAATGGGAAAGTATATCTAATAGTAGGATATGGGATTTACCAAGTGATAAGAGTAGCATTCTTCCTGCTTTAAGATTGAGCTACACTCATCTACCTTCTCATTTAAAGCGATGCTTTACTTATTGTTCCATATTTCCTAAAGGCTATGGAATAAAAAAGTGGAACTTGATCCATTTATGGATGGCTGAAGGTATCTTGCCACAACCAAAGACTGGGAAGCGAATGGAAGATGTAGGAGATGAATGCTTTCAAGAGTTGCTATCTAGGTCATTCTTTCATCAGTCATCTCACCACATATCGTGTTTTATGATGCATGACCTTATCAATGATCTAGCACAGTGTGTTGCAGGTGAATTCTGTTACAAGCTAGATGATGATAATCCAAGCAAAATCACTGTGAGTGTTCGTCATTTATCATATTTACAAGGCATATATGATCATGACCCTGAAAAATTTGAGGCCCTCGCTGAACTTAGGACCTTCCTACCATTTAGATTCTCAGACTTTGGTTACTCCTCTTCAATTACTAGTATGGTTTCAATTCTATTACCAAAACTGAAACGCCTGCGTGTGCTCTCTTTGTCTCATTATCCAATTACCAAGTTGCATGATTCTGTTGGAAACTTAATGCATCTGCGGTACTTGGATCTTTCTTACACTGCAATTGAGCATCTACCTGATTCTGTAAGCACTTTGTATAACTTGGAGACACTCTTGTTGTTAGGTTGTCGTCGACTCACCATGTTACCAGCAAACATGTCCAACCTTGTCAACTTGCGCCATCTTGATATTAGTGGAAGCAGGGTGACTGAGATGCCAGCAAAATTTGGTAGACTAAAATCTCTCCAAGTTTTGACTAGTTTTGTTGTTAGCAGTGACGGGGGATCAAAAGTTAGTGAGTTGGGGGAGCTTTCTGAACTTCATGGAACACTTTTGATTGTGAACCTGCAGAATGTAGTTGATGAAAGAGAAGCCTTGAATGCAAGGTTGAGGAGAAAGAAACATCTTCAAGAGCTAGAATTCAAGTGGACGACTACAACTCATGATGTACAGAGTGAAACTAATGTACTCGAAATGCTAGAGCCACATCAAAATGTGAAAAGGCTCAAAATTCAGAATTTTGGTGGTAATAAGTTGCCAAATTGGTTGGGGAGTTCTTCATTCTCTAGTATGGTGTTTCTATATCTTTCAGAGTGCGGAAGTTGCTTGTCATTGCCATCCCTTGGACAATTGCCCTCCCTCAGAGAACTCTATATAGCAAAGATGACAAGCCTACAGAAGGTGGGTCCTGAATTCTATGGGAATGCAGTTGAGCCATTCAGATCATTGAAGATCATGAAGTTTGAGGACATGCCCAACTGGAAAAAGTGGTCAACCATTGAACTTGAACAAAGTGGGGGGTTCCCTTCACTCCAAGAGCTTTACATACAGAGATGTCCTAAACTGACCAGAAAGTTACCTCATCAACTTCCTTCATTGGATAAATTAGTGATCACTGCATGTCAAGCTCTCACAGATTCAATGCCATGGGTTCCAAGATTGAGAGAATTAGAGCTAACTGGTTGCGATGCATTGGTATCATTATCTGAGCAAATGATGCAGGGAAACACATGTCTTCAAATCATGGCCATAAACAATTGCTCATCTCTAGTCACCATCCCTAGGGATGGCCTACCAAGTACACTAAGATCACTTGAAATCTATGAGTGCAGGAATTTACAACTAGTCCATCCTAAGAGTTTGATGCAGGAGTCTCACTACTATCATTCCCTTGAGAGATTACACTTAAAAAGTTGCTGTGATTCTCTCATCTCCTTTCCATTATCACTCTTCACCAAGCTTGAAGAACTTCATGTACAAGACTGTAGCAATCTCCAGTTGATTTCATCTGCTCCAAACAGTCTCCCATATCTTCGAAAGTTGAAACTGAAGGAATGCTCCAAACTGGCTTGGTTCCCTGAAGGAGGGTTGCCTGCAATGACATCACTGACTTCTCTTCATATCAGTGGACTTCCCAGTCTCACTTCACTAGAGCACACTGGAATTCAGTACATTGCCTCTCTCAAAATTCTGAAGATTAAAGCTTGTGATAACCTTGCATCCCTACCTTTACACAGATTAGTTACCTCCCTTTCTCATCTTACCATCAGAGCATGCCCATTGTTAACGTTGCTGTGTGGAAGGTACACAGGGGAATACTGGGATATGGTTTCTCGTATACCCTCTAGAGTTATTGAAGATTAG 3402 0.4089 MVVDMLGSFVSAFLQVLLDRIAGHELIDFFRGNHLDEALLVKLKMLLLSVTTVISDAEEKQFIDPLVKEWVDRLKNAAYDADDVLDEIATKAMQDKMDSGFHTTLDQVRDYASSLNPFAERVKSKVDRIVERLKSIIEHKDLLGLKENGVDKSLHLASATTSLVDEHRVYGRSGDREKIIDFLLSGNSNEEGVPVVAIVGMGGVGKTTLAQLLYNDVRVRNHFQSRSWTSVSETLNVYEITKKVFESFTLWYSNISDLNVLQIKLKDRFTRQRFLLVLDGFQNENFLDWDILQRPFLSGTSGSRIVVTTRSQSVATAIRVDLTHSLSLLSHEDTWKLFSSHAFKSGNPDEHPVLTQIGKKIVKKCNGLPLAAKTLGSLLRSKEDAEEWESISNSRIWDLPSDKSSILPALRLSYTHLPSHLKRCFTYCSIFPKGYGIKKWNLIHLWMAEGILPQPKTGKRMEDVGDECFQELLSRSFFHQSSHHISCFMMHDLINDLAQCVAGEFCYKLDDDNPSKITVSVRHLSYLQGIYDHDPEKFEALAELRTFLPFRFSDFGYSSSITSMVSILLPKLKRLRVLSLSHYPITKLHDSVGNLMHLRYLDLSYTAIEHLPDSVSTLYNLETLLLLGCRRLTMLPANMSNLVNLRHLDISGSRVTEMPAKFGRLKSLQVLTSFVVSSDGGSKVSELGELSELHGTLLIVNLQNVVDEREALNARLRRKKHLQELEFKWTTTTHDVQSETNVLEMLEPHQNVKRLKIQNFGGNKLPNWLGSSSFSSMVFLYLSECGSCLSLPSLGQLPSLRELYIAKMTSLQKVGPEFYGNAVEPFRSLKIMKFEDMPNWKKWSTIELEQSGGFPSLQELYIQRCPKLTRKLPHQLPSLDKLVITACQALTDSMPWVPRLRELELTGCDALVSLSEQMMQGNTCLQIMAINNCSSLVTIPRDGLPSTLRSLEIYECRNLQLVHPKSLMQESHYYHSLERLHLKSCCDSLISFPLSLFTKLEELHVQDCSNLQLISSAPNSLPYLRKLKLKECSKLAWFPEGGLPAMTSLTSLHISGLPSLTSLEHTGIQYIASLKILKIKACDNLASLPLHRLVTSLSHLTIRACPLLTLLCGRYTGEYWDMVSRIPSRVIED 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00097 1133 PANTHER DISEASE RESISTANCE PROTEIN RP 54 868 IPR044974 GO:0006952
Gabi102g00097 1133 Gene3D - 151 323 IPR027417 -
Gabi102g00097 1133 Pfam NB-ARC domain 176 413 IPR002182 GO:0043531
Gabi102g00097 1133 SMART LRR_typ_2 642 665 IPR003591 -
Gabi102g00097 1133 SMART LRR_typ_2 572 594 IPR003591 -
Gabi102g00097 1133 SMART LRR_typ_2 595 618 IPR003591 -
Gabi102g00097 1133 Gene3D - 36 137 - -
Gabi102g00097 1133 Pfam Rx N-terminal domain 9 100 IPR041118 -
Gabi102g00097 1133 SUPERFAMILY RNI-like 854 1108 - -
Gabi102g00097 1133 FunFam Probable disease resistance protein At1g63360 414 500 - -
Gabi102g00097 1133 Gene3D Ribonuclease Inhibitor 518 892 IPR032675 -
Gabi102g00097 1133 Gene3D Ribonuclease Inhibitor 893 1124 IPR032675 -
Gabi102g00097 1133 Pfam Leucine rich repeat 574 629 IPR001611 GO:0005515
Gabi102g00097 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 428 IPR027417 -
Gabi102g00097 1133 Coils Coil 699 722 - -
Gabi102g00097 1133 PRINTS Disease resistance protein signature 640 656 - -
Gabi102g00097 1133 PRINTS Disease resistance protein signature 268 282 - -
Gabi102g00097 1133 PRINTS Disease resistance protein signature 365 379 - -
Gabi102g00097 1133 PRINTS Disease resistance protein signature 195 210 - -
Gabi102g00097 1133 SUPERFAMILY L domain-like 490 887 - -
Gabi102g00097 1133 Gene3D - 419 499 IPR036388 -
Gabi102g00097 1133 Gene3D - 328 418 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00097 Gabi-Chr102 863223 866696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00097 172 652 WRKY Transcription Factor Family AT5G45050 21.964 7.35e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00097 - - cam:101492735 1709.5