Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00085 ATGGCCAAGAAGAAGAGCTGGTTTAATCTGGTGAAAAGGCTTTTTATATGGGACACACATTCCACACAAGAGAAGAAGGAGAAAAGAAGGAAATGGATCTTTGGAAGGCTAAAGACCAAGAGATTACCTTCAATTACAGCTCCACCTTCATCACTAGAAACCATTGCCTCAGCTGAAGCTGCTGCTGGTACAGCTGATCAGGTTGTTCAGCTCACTGGAGTCTCACAATCAGCTCATCAATGTGAAGAAAACTCAGAAGAATCTCAACCTGTTAAAACTATAGATGGTGCTCCTTCATCCACATACCAATGCCAGAGGGAGATTAAAGAATCTGCAGCCATCAAAATTCAAACTGCATTTCGGAGTTACCTAGCAAGGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGCAGAGCAGTAAGACGCCAAGCTATGAGTACTCTGAAGTGCTTGCAGTCCATTGTAAGTATCCAGTCACAGGTCTGTGCAAGGAGACTCCAAATGGTTGAAGGGAGATGGGAAGAGGTGCAAGATTCTAAAGACAAGATAATAAGGATGGACTCAAACAGTGAGAGAAAGTGGGGTGACAGCACTATATTGACAGAAGAGGTAGATGCCTCTTGCATGAGCAAGAAAGATACAGTTCTTAAGAGAGAGAGAATAAAAGAATACTCGTTTAACCATAGAAGGTCAGCAGAGTCAGAAAGGAGTAAAGTCAATGGAAGATGGAGGTACTGGCTGGAGCAATGGGTAGATACACAACTTTCTAAAAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTCTAGAGCTAGAGAGGAATATGGAGGAAGACAACTTAAGCTGAGAAGTACTCAGAGACAAAATCTAGTTGAAGGATTAGATTCTCCAATACTTGCTTCAAGAAAATCTTTTCCTCACAGGAGGCAGTGTTCAGTGGGAGAAGACCACTCATTTTCAAGCCCTCTTGCAACTCCAGCATATATGGCTGCAACTGAATCAGCAAAAGCAAAAGCAAGATCAACAAGCTCCCCAAAAGTAAGGACAGGGAATTTAGACACAAACTCTGATAGCTATTCACCATGCAAGAAAAAGCTATCAGTTGTATCTTCTAATAATAGTGAAGTGCTTATTAGTGGTAGGATGGGGAAGCTTAGTAGTACTCAACAAAGATCTCCAAGCTTTAAGGGCCTTTCAGTGCCTATAAAATCAAGCAGGACTATAAAGGATCTCAGCATTAATTCAGACTGTTCACTGTCCAATTGGGATAGACAAAGTTCCTTCAAATGA 1320 0.4152 MAKKKSWFNLVKRLFIWDTHSTQEKKEKRRKWIFGRLKTKRLPSITAPPSSLETIASAEAAAGTADQVVQLTGVSQSAHQCEENSEESQPVKTIDGAPSSTYQCQREIKESAAIKIQTAFRSYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLQMVEGRWEEVQDSKDKIIRMDSNSERKWGDSTILTEEVDASCMSKKDTVLKRERIKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRAREEYGGRQLKLRSTQRQNLVEGLDSPILASRKSFPHRRQCSVGEDHSFSSPLATPAYMAATESAKAKARSTSSPKVRTGNLDTNSDSYSPCKKKLSVVSSNNSEVLISGRMGKLSSTQQRSPSFKGLSVPIKSSRTIKDLSINSDCSLSNWDRQSSFK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00085 439 Gene3D - 109 175 - -
Gabi102g00085 439 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Gabi102g00085 439 MobiDBLite consensus disorder prediction 346 368 - -
Gabi102g00085 439 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Gabi102g00085 439 SMART iq_5 108 130 IPR000048 GO:0005515
Gabi102g00085 439 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Gabi102g00085 439 Pfam Protein of unknown function (DUF4005) 322 402 IPR025064 -
Gabi102g00085 439 MobiDBLite consensus disorder prediction 345 368 - -
Gabi102g00085 439 Pfam IQ calmodulin-binding motif 111 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00085 Gabi-Chr102 723875 730264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00085 1 439 IQD Protein Family AT5G13460 47.639 4.82e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00085 - - gmx:100800192 674.085