Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00075 ATGGACTTAGGAAAAGAAAAGTTTGTATTAAGAAGGGCAAAGAAAAAAGAAAAAAAAACATTATCAACATCAGAAGAACTACTCGTTAAAAAACTATTCTTTGAGTTGTATCCGTTTTCAAAGATTGCTTACAAAATCACCAATCAGGCCATTATTGAAGCCATGGAAGGGGAAAAAGTGATTAATATCCTTGATCTCAGTGTATCTGATGCTACTCAGTGGATTTATCTTATGCAGAGTTTAAAAGAGCGTTTACCAAACCATTCATATTTAAAAATTACAATTACATGCATACATGAGAAGAAAGAGGTCTTAGAGCAAATGAGTTTCCATTTAAGAGTAGAAGCTGAAAAGTTGAATTTCCCTTTTCAATTTAATGCTATTGTAAGCAACTTGGAGAACCTTGACCTTGAAAGATTGCCTTTCAAGAAAGGAGAGCCTCTTGCAATTAGTTGTGTACTTCAACTTCACTCTCTTCTTGCCACTGATGATCAAATGGTAAAAAATCCAACTCCTGATTCAGCATTGTCACCTCCTTCTGCATGTCCTTCACCTAAGATGGAGTGTTTTCTGAGTGGCTTGTGGAAGCTTCATCCTAAAGTGATGGTGATCACTGAGCAAGAATCAAATGTTAATGGTTCCACATTGACAGAGAGGGTGGACAAAGCATTGAACTTTTATGGGGCCCTGTTTGATTGCTTGGAATCTACCATTTCAAAAACATTAGTAGAAAGAACCTTACTGGAGAAGATGCTATTAGGGGAGCAAATAAAAAATATTATTGCATGTGAAGGAGTTAAAAGAAAGGAGAGGCATGAGAAACTTGAGACATGGATCACTAGGCTTTTATTGGCAGGTTTTGGGAAGGTACCTATTAGCTTTGATGGGATGCAACATGCCGCAAAGATGTTACAAAGCTATGCACATGGATATCAAATCCGTCATGAGAATAAATGTTTGTTTATCTGTTGGGATGGTAATCCTCTCTTTTCTGTATCAGCTTGGAGGTTTCCCTCCGAAGATCTATATGCTTAG 1035 0.37 MDLGKEKFVLRRAKKKEKKTLSTSEELLVKKLFFELYPFSKIAYKITNQAIIEAMEGEKVINILDLSVSDATQWIYLMQSLKERLPNHSYLKITITCIHEKKEVLEQMSFHLRVEAEKLNFPFQFNAIVSNLENLDLERLPFKKGEPLAISCVLQLHSLLATDDQMVKNPTPDSALSPPSACPSPKMECFLSGLWKLHPKVMVITEQESNVNGSTLTERVDKALNFYGALFDCLESTISKTLVERTLLEKMLLGEQIKNIIACEGVKRKERHEKLETWITRLLLAGFGKVPISFDGMQHAAKMLQSYAHGYQIRHENKCLFICWDGNPLFSVSAWRFPSEDLYA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00075 344 ProSiteProfiles GRAS family profile. 1 336 IPR005202 -
Gabi102g00075 344 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 332 IPR005202 -
Gabi102g00075 344 Pfam GRAS domain family 13 336 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00075 Gabi-Chr102 676421 677630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00075 17 336 GRAS Transcription Factor Family AT1G50420 44.875 1.45e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi102g00075 GRAS 1.1e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00075 - - vra:106778126 412.535