Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00074 ATGCACGGTCAGTTGGTTGTCCAACAAAGCCAATTTATGGACCCAGGTTCGCAGTATCAATTCCCTGAAGAGACGGACAGGGGCTTACAACTAGTCCATCTTCTTAAGGACTGTGTTAAGTATATTGAATCAGGGAACATCACTAGAGCAGATACTGCACTGTATAAAATTTCTAAGCTTGCCCCCCCTCATGGTGATTCAATGCAGCGGGTAGCAACTTATTTCAGTGAGGCACTAGCTTTTCAAGTGATCAAAAATAGGCGTGGCATACCCAAAATTCTTGGTTTGTCAAAAACACTATCAACATCAGAAGAACTACTTGTTAAGAAACTATTCTTTGAGTTGTATCCGTTTTCAAAGAGTGCATACAAGATCACAAATCAGGCCATTATTGAAGCCATGGATGGGGAAAAAATAATTAATATCCTTGATCTCAGTGTGTCTGATGCCACTCAGTGGATTTATCTTATGCAGAGTTTAAAAGAGCGTTTACCAAACCATTCATATCTGAAAATTACAATTACAGGCATACATGAGAAGAAAGAGGTCTTAGAGCAAATGGAGTTACATTTAAGAGTAGAAGCTGAAAATATGAATTTTTCTTTTCAATTCAATGCTATTGTAAGCAACTTGGAGAACCTTGACCTTGAAAGATTGCCTTTCGATAAAGGAGAGCCTCTTGCAATTAGTTGTGTTCTTCAACTTCACTCTCTTCTTGCAACTGATGATCAAATGGTAAAAAATCCAAGTCCTGATTCGACAATGTCACCTCTTTCTACATGCCCTTCACCTAAGATGGAGTGTTTTCTAAGTGGCCTATGGAAGCTTCGTCCTAAAGTGATGGTGATCACTGAGCAAGAATCAAATGTTAATGGTTCCACTTTGACAGAGAGGATCAACAACGCATTGAACTTTTATGGGGCACTATTTGATTGCTTGGAAGCTACCATTTCAAAAGCATCAGTAGAGAGAACCTTAGTGGAGAAGATGCTATTAAGGGAGCAAATAAAAAACATCATTGCATGTGAAGGAGTTAAGAGAAAAGAGAGGCATGAGAAACTTGAGACATGGATCACAAGACTTTTATTGGCTGGTTTTGTGAAGGTACCTATCAGCTTTGGTGGGATGCTACAGACAACAAAGCTGTTACAAAGCTACATACATGGATATCAAATCCGTCACGAGAATGAGTGCTTATTTATCTGTTGGAATGGTAATCCTCTCTTTTATATATCAGCCTGGAGATTTCCCTCAGATGATATTTGA 1266 0.3886 MHGQLVVQQSQFMDPGSQYQFPEETDRGLQLVHLLKDCVKYIESGNITRADTALYKISKLAPPHGDSMQRVATYFSEALAFQVIKNRRGIPKILGLSKTLSTSEELLVKKLFFELYPFSKSAYKITNQAIIEAMDGEKIINILDLSVSDATQWIYLMQSLKERLPNHSYLKITITGIHEKKEVLEQMELHLRVEAENMNFSFQFNAIVSNLENLDLERLPFDKGEPLAISCVLQLHSLLATDDQMVKNPSPDSTMSPLSTCPSPKMECFLSGLWKLRPKVMVITEQESNVNGSTLTERINNALNFYGALFDCLEATISKASVERTLVEKMLLREQIKNIIACEGVKRKERHEKLETWITRLLLAGFVKVPISFGGMLQTTKLLQSYIHGYQIRHENECLFICWNGNPLFYISAWRFPSDDI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00074 421 ProSiteProfiles GRAS family profile. 22 415 IPR005202 -
Gabi102g00074 421 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 30 408 IPR005202 -
Gabi102g00074 421 Pfam GRAS domain family 31 415 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00074 Gabi-Chr102 669914 671780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00074 22 415 GRAS Transcription Factor Family AT1G50420 44.394 5.34e-123 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi102g00074 GRAS 7.3e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00074 - - vra:106778126 485.723