Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00072 ATGGGTCCATCTTCTGTAAATGTCACTTCCCGCTTTCATGAATCTGTCACTCGAAATGCATTTCGTTCTTATCTCGCTGAGTTTATCTCTACTTTCTTCTATGTCTTAGTTGTTGTTGGCTCTGGAATGTCCTCACGGAAATTGATGCCTGATGCTTCACTGAACCCAACTAATCTGGTTGTGGTTGCCATTGCCAATGCTTTTGCTTTGTCCTCAGTTTTGTATATTGCATGGGACATCTCCGGTGGACATGTCAACCCTGCCGTGACCTTTGCAATGGCAGTGGGAGGCCACATTAGCATACCAACTGCTCTCTTTTACTGGGTTGCTCAGTTGATAGCCTCTGTTATCGCATGCCTTGTCCTGAGGGTTATTGTTGTTGGAATGCATGTACCAACATACTCTATTGCAGAAGAGATGACAGGTTTTGGAGCATCCATATTAGAGGGTCTACTAACATTTGTTTTGGTGTACACTGTGTATGCTGCTAGGGACCCTAGGCGTGGTCCATTGAGTTCCACTGGTACACTTGTTATTGGTTTAATAGTTGGGGCAAGTGTATTGGCCGCTGGTCCATTTTCTGGCGGGTCAATGAACCCTGCATGTGCTTTTGGCTCAGCTGCCATTGCAGGCACTTTCAGGAATCAAGCAGTATATTGGGTTGGACCCTTGATTGGTGCTACCATTGCTGGCCTTCTTTATGATAATGTGGTGTTCCCTTCTCAGAATGCAGATTCAATTAGAGGGGTTTCAGAAAGAGTTGGGGTGTAA 771 0.454 MGPSSVNVTSRFHESVTRNAFRSYLAEFISTFFYVLVVVGSGMSSRKLMPDASLNPTNLVVVAIANAFALSSVLYIAWDISGGHVNPAVTFAMAVGGHISIPTALFYWVAQLIASVIACLVLRVIVVGMHVPTYSIAEEMTGFGASILEGLLTFVLVYTVYAARDPRRGPLSSTGTLVIGLIVGASVLAAGPFSGGSMNPACAFGSAAIAGTFRNQAVYWVGPLIGATIAGLLYDNVVFPSQNADSIRGVSERVGV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00072 256 FunFam Probable aquaporin TIP5-1 6 246 - -
Gabi102g00072 256 SUPERFAMILY Aquaporin-like 12 242 IPR023271 -
Gabi102g00072 256 Pfam Major intrinsic protein 17 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi102g00072 256 PANTHER AQUAPORIN-8 10 240 IPR034294 -
Gabi102g00072 256 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Gabi102g00072 256 Gene3D Glycerol uptake facilitator protein. 5 250 IPR023271 -
Gabi102g00072 256 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi102g00072 256 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi102g00072 256 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi102g00072 256 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi102g00072 256 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi102g00072 256 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00072 Gabi-Chr102 655886 657802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00072 9 256 Major Intrinsic Protein MIP AT3G47440 62.500 5.62e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00072 K09873 - gmx:100801448 444.891