Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00049 ATGGCTCCTTCTTCTCCGAGTGTTACTGATTCGCAAGCTCCGTCAACAACACTCGAAGCCGTAGAGAACGATCTTCAGCCGTTCTTTGTTCTTCATAAATCTTCATCCCAAAGAAAAGACAGAACACCAACAAGACGGGGAAAATTGCGCAAGAGAAATGAGCCATCTTCATCATCACCACAAGGTGCAAAGAAACTGGAAGGAAGTATGACTGAAGAATCTGATTGCTTGCAAATTGAAACTTTCGACATTGTCTGGACAAAAATTGAGTCTACCATTAAGGACGTGTTGAGAGATCTCAATGCTAGTGTATTTAATGATATACAACAATGGGTTCTAGAGTGCTTCAATGCTACTAGATTGCTTGGAGAACGTAATATTGCTGAAGCAACTCGGTCTTTCCCTATTCTAAAAAATATTACCCCAGGGCAGCTGTTTACTGCATTAGTTATTATCAGAAACATAGAGTTTGTAGATGATATATTGACATTTGAAGAGCTTGGCCATTTCCTGAAATCCCATGGATGCCATGTGGCTATGCTTTCATCGCTGGAATTTTCGTTAAAAAATGGGATTGCTGGTTGCTTGAAAGCTTTACTGCGGGAGTTTCTAGGGGGTACTATAGATTCAGCTGATATATCAATCTTAGCATCATGGTATAGAGAACAAGACAACTACAACAAACCACTAGTGCTGATCATTAATGACTTGGAAAGATGTTGTGGATCAGTCTTAACTGATTTCATTCTGATGGTGAGTGAATGGGTTATCAAGGTCCCAATCATCTTAATATTTGGAGTTGCAACGTCAGTGGATACCCCTAGAAACATTCTGCCATCACATGCTCTTGAGCGATTGTGCCCGTCTAAGTTTATGCTTGGAACCCCAGCTGAGAGAATGGATGCAATTGTTGAGGCTGTTCTTGTGAAAAATTGCACCACATTTAATATTGGTCATAAAGTGGCACTCTTCCTGAGAAACTACTTCGTCAACCAGGATGGGACAGTAACATCTTTTATACGAGCTTTGAAGGTAGCATGCTTTTTACATTTCTCTAAGGAACCTCTGAGTCTCATACCTGGGCGAATACTCACAGAGGACAAAAAGGGAAAATCTGCATTATCACCTGAGACTATGTTGAAATACATGGATGAACTTCCATCGTATGCAAGGAATCAAATCGTTGATCAGACTAGAAAGAGCATGGCTCAGGGTTTGTCAGAATTGGTGACAGTGCAGAAGCTATGGAGCACTGCAGTTCTCTGCCTATATGAAGCTGGAAAATATAGCAGAGTACGACTGCTGGATTTGTTTTGTGAAGTGCTCAATCCAGATTTGTACCTGTCAAGGGGTTCTGATTGTCATGTGGGGAATGGAAAAGATCATGGGGATCTCCCTACAGGAATGCTATATCAGTTGATTGAGAATTGGGAAAAACTTACTGCAGATATTTCTGAGATTCACGAGAAATTGAAAATGTTGCAATCTTCAGTAAGATGTGAAGATGGAAAGAGTCCACGCAAGAGTTCCAAGGACATTTCCAAGAGATTTGCGTCCAGGGTCTCAGTAAACATTGAGAAGGACTCGAGAATGTTAAACTCGCAAGCTCTCACATTTATAGATTGTTTAGTTAGAGATTATTTGAGGCCCATTGAAGGCATGCCTTTTCATGAAATTTTCTGCTTCAAGAATGTTGAGAAGCTTCAATTGGTTTTGATTGGAGATCCAAGAAGAAGGATTCAACTTGATCTGTTGGAGCTCCATGAGATTTTAGGGTGCCATTGCTGTCACACGAGTGGCAATGCCCTATTGCCATCCAAACATGATACCTCAATTATGTATTCCCTGGCTCAAGAGCATGGAGATCTTATCAATGTTCATGACTGGTACCAGTCTTTTAGAGCAATTGCTTTTCAACATACGAATAAACGGAAACAAAAATCGAAGCAGTCCCCCCTACCAAAGAAGAGAAAAGATACAAATGAATCTGGAGACCAAAATGAAGCATCAATTCAAGCTCGCTTTTGCAGGGCAGTTACAGAGCTGCAGATAGCTGGGCTAGTTAAAATGCCAAGCAAGAGACGCCCAAATTTTGTACAAAGAGTAGCATTTGGACTTTGA 2121 0.4083 MAPSSPSVTDSQAPSTTLEAVENDLQPFFVLHKSSSQRKDRTPTRRGKLRKRNEPSSSSPQGAKKLEGSMTEESDCLQIETFDIVWTKIESTIKDVLRDLNASVFNDIQQWVLECFNATRLLGERNIAEATRSFPILKNITPGQLFTALVIIRNIEFVDDILTFEELGHFLKSHGCHVAMLSSLEFSLKNGIAGCLKALLREFLGGTIDSADISILASWYREQDNYNKPLVLIINDLERCCGSVLTDFILMVSEWVIKVPIILIFGVATSVDTPRNILPSHALERLCPSKFMLGTPAERMDAIVEAVLVKNCTTFNIGHKVALFLRNYFVNQDGTVTSFIRALKVACFLHFSKEPLSLIPGRILTEDKKGKSALSPETMLKYMDELPSYARNQIVDQTRKSMAQGLSELVTVQKLWSTAVLCLYEAGKYSRVRLLDLFCEVLNPDLYLSRGSDCHVGNGKDHGDLPTGMLYQLIENWEKLTADISEIHEKLKMLQSSVRCEDGKSPRKSSKDISKRFASRVSVNIEKDSRMLNSQALTFIDCLVRDYLRPIEGMPFHEIFCFKNVEKLQLVLIGDPRRRIQLDLLELHEILGCHCCHTSGNALLPSKHDTSIMYSLAQEHGDLINVHDWYQSFRAIAFQHTNKRKQKSKQSPLPKKRKDTNESGDQNEASIQARFCRAVTELQIAGLVKMPSKRRPNFVQRVAFGL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00049 706 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 226 358 IPR045667 -
Gabi102g00049 706 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 71 204 IPR045667 -
Gabi102g00049 706 CDD Orc3 80 704 - -
Gabi102g00049 706 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 705 IPR020795 GO:0003677|GO:0005664|GO:0006260
Gabi102g00049 706 MobiDBLite consensus disorder prediction 641 668 - -
Gabi102g00049 706 MobiDBLite consensus disorder prediction 34 53 - -
Gabi102g00049 706 MobiDBLite consensus disorder prediction 29 72 - -
Gabi102g00049 706 Pfam Origin recognition complex winged helix C-terminal 577 704 IPR040855 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00049 1 675 Core DNA Replication Machinery Family AT5G16690 47.100 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00049 K02605 - gmx:100780646 1108.59