Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00047 ATGAATGTGAGTAGCAGTGGTGGCAGTGGGGGAGGGATGATGATGGGTTTCAGTAACAGTTATAATAGGTCGCCTTTCACAGTGTCTCAGTGGCAGGAACTGGAGCACCAAGCTTTGATCTTCAAGTACATGGTGGCGGGTCTTCCTGTGCCACCTGATCTTGTGCTTCCCATTCAGAAGAGCTTCGAGTCTATTTCACATAGCTTCTTTCACCATCCCACTTTGAGCTACTGTTCCTTCTATGGGAAGAAGGTGGACCCAGAGCCAGGAAGATGCAGGAGAACTGATGGAAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACACCATCATCATCCTCTGTGACATCACTGACTGTCACTGGTGGCAGCAGTGGAACTGAAAACTTCCAGAACCTTCCCAGAAATGCCTTTGGTAATCTCCAAGGTACTGGTTCTGGAACCGAACATACCAACTATCATCTAGATTCCATTCCCTATGGGATTCCAAGTAAAGAATACAGGTATCTTGAAGGACTTAAATCTGAGGGTGGTGAACATAGCTTCTTTTCTGAAGCTTCAGGAAGCAACAAGGTTCTCCAAATGGAGTCGCAGCTGGAAAACACCTGGCCTTTGATGTCAACCAGAGTTGCCTCTTTTTCTTCATCGAAATCGAGTAATAATTCCATGTTGCAGGGTGATTATCCCCAGCATTCATTTTTATCTAGTGAATATGTGTCAGGAGAACCTGTGAAGCATGAGGGTCAGCCTCTTCGACCTTTTTTTGATGAATGGCCTAAAAGCAGAGAATCATGGTCTGGTCTAGAAGATGAGAGATCCAACCAGATAGCATTCTCCTCAACTCAACTCTCAATATCCCTTCCTATGTCATCTTCTGGCTTCTCAACAACAAGCTCTCAATCACCACATGGTGAGATTTGA 996 0.4598 MNVSSSGGSGGGMMMGFSNSYNRSPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQKSFESISHSFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTPSSSSVTSLTVTGGSSGTENFQNLPRNAFGNLQGTGSGTEHTNYHLDSIPYGIPSKEYRYLEGLKSEGGEHSFFSEASGSNKVLQMESQLENTWPLMSTRVASFSSSKSSNNSMLQGDYPQHSFLSSEYVSGEPVKHEGQPLRPFFDEWPKSRESWSGLEDERSNQIAFSSTQLSISLPMSSSGFSTTSSQSPHGEI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00047 331 SMART QLQ_2 24 60 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi102g00047 331 MobiDBLite consensus disorder prediction 127 177 - -
Gabi102g00047 331 Pfam WRC 87 129 IPR014977 -
Gabi102g00047 331 MobiDBLite consensus disorder prediction 312 331 - -
Gabi102g00047 331 Pfam QLQ 25 59 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi102g00047 331 MobiDBLite consensus disorder prediction 115 177 - -
Gabi102g00047 331 ProSiteProfiles WRC domain profile. 86 130 IPR014977 -
Gabi102g00047 331 PANTHER GROWTH-REGULATING FACTOR 5 13 318 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gabi102g00047 331 ProSiteProfiles QLQ domain profile. 25 60 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00047 Gabi-Chr102 442079 446213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00047 14 129 GRF Transcription Factor Family AT3G13960 58.871 4.89e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gabi102g00047 WRC 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00047 - - gmx:100787567 520.005