Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00038 ATGATTCAGAACACTGATATGGGACTCGAATCGGGGACTTGTAATGTATGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAATCGAGCTTTCATGGGCTCAAAGGCTGAAGAATTCTCTGATGAAAACTGTCGCTTAGGGGAGGCTAATCAGCACTCTATGGGTGAAACCAGTAACATGCATAGTGTTAATTCCAGTCATGATTCTCTATCTGAAAATGCCGAGAGTAGACGTGCCTTGTCAGAAAACTATCAGGATTCCAAGTGTTTAGAAGGTCTTGATGACAGCACTTCTTGTATCAGTAGAGTAAGTAATGCTAGTTTAGTGAGTGGTAGCCATCAAATAAGTTCAGACAGAATAAATATATCTTGTAGTTCAGCTTCAGTTAGTCGCTTAGGGGCAGAAGGATCTAGAAGTGGGCCATCTGTTGGCATGTCTGAGATTCTCTCTTCTAAAGATGCAGATATCCCCGAAAATTTGTCAGAATGCTGTATGGAAAATGTTGATTCATCTTTGACCAAAGAGAGAGCACCTATTATTGTTTCCAGTGAAAAATCTCTTGCAGATAGGGATAACCCTATTAACGGTACTGCCAAAGTTTCAGTAAAAATATATCCAAAGTCAGAATCAGATACTGACAACAACGTTGGGGATGCTAAAGATGAAGATCATAAATTTTCAGCCCATGATGGACTGCATGAGAAGGCTGAGGAGCAGGTCAAATCACAACCTCAATCAGAAGATGAGAGTGATGACTCAGATGTTGTTGAGCATGATATAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGCGCGGAGCACACCTACTGCATGCGGGAAAGGCTTCAGAAGGTCCCTGAAGGGGATTGGTTATGTGAAGAATGCAAATATGCAGAGGAGACTGCAAATCAAAGGCTTGATGTTGAAGAAAAAATAATTCATAAAGTTAGTTCAACTTCACAAATTTGTGGCAAAAGGCCTTCTGAAAGCGTGGAAGTAGCTACATCGTCAAAAAGGCAAGCTCTTGAATCAAGCACAGGATCACCAAAGTCATCAAGTCCCAAGAGAATAGTTTCACTGTCACGTGAATCTTCATTCAAGAGCTTAGATAAAGGAAAGGTGAAACCTGGTCGTCAAATCCCCATTCGTAATCGCCCCGGTGGTGGTGACATAGAACTTGCTCGTTCTGTCTCCACTGGCTCTCGGAGCCAAACTGCAAAGAGCACATTGTTGAAGTCTAGTTCATTCAACAACTTCAATTCCAAGCCTAGAGTCAAACCTTTTGATGAAGTTGTTCCCCAGAAGCAGAAAGGGGGTGGCGAACATACTTCTAGGAACATGGATTCACCTGCTGGGATGATAAGCAAGTCAGTGTCATTTAAATCCTCAAATTTGGGTCGTTCAAGTGCTACTGAATCAAAAGTTAAAATGCTTTCTTCTAAGTCTGGAACTGCTCATGATTTAAAAGGATCAAGGAATGGAAAAGAATCAGGTGCATTTGACAGGAAATTTCTGTCTAGGGTTGATCGGCCTCTTGGTTGTTCAACCATGGCTAGTTTGGTTTCCACATCTAAGGTTGATCTGAACGTTACACCTCGTGGTGAAACAGCAAAACCTTCAGCAGTTAATAACAATCGAGACTTTAAGGTCAATCAAGATGGAAAATTAAGTTCATTGTCAAAGTCTATGAGTAATATAAGCCATAGAAGTCCGGATCCCCAAGTTTGTTCAGAGAGAACATCAACCAATGTTGATGAAACTCAACAGGATGGGCTGCCTCGATCACGAGAGACAGCAAACCAGGTTGACAAAACCAAAGATAGCTGTAGTGATCGTGTGTGGTCAGGTGTTACTGATGCTTCAAAAGGCCCATTCTGCCATAAATGTAAGGATTTTGTCCATGCTACGGAATGTTGCATATTTGGTAATACACAGGAATTTGGTGTTGAAGTATCAGTCACTGCCACAAGTACTTCCAAAGAGGATATTCATAAAGGTAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATACAGAAGAAGAAAGAAGTACCTGATCAAACTGATGAGTTTCCTACATCAGGCGCAGACTTGAATTGTGAAATCACTTCTCAAGACCAAGTGTTGGTTTCCAACAAGAATAGTACATCTACTGCAGAAATCAATGCGAGTCAGGAAAGACTTGAGAATTCTGGGTTTGAAACTTCCAAATGTTTGTCCACCTATGATTTGAAGCAACATAGCTTTTCACCAACTGATTTTTGTTCTCAACCGAGAAAGTCAGATTCTGTTGGTCCTGCTTCTGGAAAGCCTGCAGTGAGAGACTTGCCTAATCACGCTTTGGCAATCTCAAGAGTTCTTTCAAAGATATCTGCGATTCCAGAATATGAAAACATCTGGCAGGGTGTCTTTCAAGTGCATAGAAGTGGAAAGCCTCCTGAGTTGTATACTGGAATTCAAGCACATTTATCCACATGTGCTTCCCCTAAGGTTTTTGAGGTAGTGAACAAGTTTCTACCTGAAATTTCCCTCAATGAAGTTTCTCGCTTGAGCACATGGCCTTCGCAATTTAATCAAGGTGGTGCTAAAGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACATTGAAAGTTATGAGAGACACTACAAGGGTCTATTGGATCACTTGATTAGAAATGATTTAGCGCTTAAAGGGATTTTTGATGGTTTTGAACTTCTCATATTCGCATCCAATCAGCTTCCTGAAAATTCACAGCGTTGGAATATGCTGTTTTTCTTGTGGGGCATATTTAGAGGGAGGAGGATTAATCATTCAGATTCTGCAAAAAAGATATTTATTCCCAGTTTGAATGTGATGTCAAATGAGAATAATTTTCCAACTGCTGTTATGACTTTGTCTGAAACTCGTTGTTCACCAAAGCGCATGGATGAAGAACCAATTACTTGTGGTAAATTTTGCAGTGCACTTCTCCCATCCACTTCCGTTGACCAAGGTCATAATATGGTAAGTAGGAATTTTGATATCAAAGAAACTATTTTTGATCAGACACATTTGGGTTCACAAAGTCAAGATATGAGAATCAACACCAAATTTACACCAAGGATTCTGACAAGCAGTTCGCAATTGTGCCAAGAAATAAATTCCACTGGTTCATCCCAGAAAGATACTGTACCTGCACATGGACAATACAGAGAGTCTAAACCTCCTGACGCAGTGGGAGCAAGTGTAGGCTGTAGGATTGTGGAAACAAAAACTGATTATGATATCTCTATTAAGCAAGAGACCTCCTTGTCTTCGGGGTTTCCTTCTTTTGGCAATCAAGAGATAGGTACCGCATGCAATATCAGTAAGGCTAAAATTTCAGAGAGGATGAACAGTGATGAAAATCAACTAAGGCCTAAAAGCAAACAGATTGAAGATCTCAATATTAACATGGAGGCAACGTTTCAGGGAGACCTGTCTGTAAAAGGAACCATCTGTCAGCAACCTAATGATAAAAAAGTTCAGCATATAGATCTTTCAGTTACAGTTATGGAGGCTTCAGCCATTAGCTGTCAGAAAATGCCTTGGAATGAGGTAAATGGCAAACTGGAAGACGGAGAAAGTTCTAGCAAGAAGCTGAGGACAGGTTTCAGTTATGGATGTCACAGTTCTGGAGGTAGGGACTCTTTTAATGGCAGTTTTGCGTCAGTTGCAAATGATTTTGGTTCCTGTTCTTCAGTTGAGGGCAAAGGATGCAAAGAAGCTTGTGATGAGAAAATCATCCACGAGGACTTGGGAACGATGGAAAGAACCTTCTTTCCTGTTGATACACACAATAAAAATGACTCGCGAATGGTGCTGAATAGCATGTCATTGAAAGGGCCTTATGAGTACGGGGACCAATTTCAAGTTGGGATTCCTAATCTAGAGCTTGCTTTGGGGGGTGAAACGAAACCGTCACATAAGGGTATGCTGCCTTTCTTTGTTGGGGCAGTTGACAAGAAAAATAACCACGAAAAGAGTCCTGATATATTGGCAGATGAGCAAGAGGATGACAATGTTGCTGCATCACTTTCCCTTTCTCTATCCTTCCCTTCTTCAAACAAGGAACATATCAAACCTGTTTCAAAACCTGAGCCTTTGCCTGATGATGGGCAACATGTGAATACTTCGTTGCTCCTTTTTGGGAGATTCACAGATAAATAA 4245 0.4097 MIQNTDMGLESGTCNVCSAPCSSCMHLNRAFMGSKAEEFSDENCRLGEANQHSMGETSNMHSVNSSHDSLSENAESRRALSENYQDSKCLEGLDDSTSCISRVSNASLVSGSHQISSDRINISCSSASVSRLGAEGSRSGPSVGMSEILSSKDADIPENLSECCMENVDSSLTKERAPIIVSSEKSLADRDNPINGTAKVSVKIYPKSESDTDNNVGDAKDEDHKFSAHDGLHEKAEEQVKSQPQSEDESDDSDVVEHDIKVCDICGDAGREDLLAICSRCSDGAEHTYCMRERLQKVPEGDWLCEECKYAEETANQRLDVEEKIIHKVSSTSQICGKRPSESVEVATSSKRQALESSTGSPKSSSPKRIVSLSRESSFKSLDKGKVKPGRQIPIRNRPGGGDIELARSVSTGSRSQTAKSTLLKSSSFNNFNSKPRVKPFDEVVPQKQKGGGEHTSRNMDSPAGMISKSVSFKSSNLGRSSATESKVKMLSSKSGTAHDLKGSRNGKESGAFDRKFLSRVDRPLGCSTMASLVSTSKVDLNVTPRGETAKPSAVNNNRDFKVNQDGKLSSLSKSMSNISHRSPDPQVCSERTSTNVDETQQDGLPRSRETANQVDKTKDSCSDRVWSGVTDASKGPFCHKCKDFVHATECCIFGNTQEFGVEVSVTATSTSKEDIHKGNRLKAAIQAALLRRPEIQKKKEVPDQTDEFPTSGADLNCEITSQDQVLVSNKNSTSTAEINASQERLENSGFETSKCLSTYDLKQHSFSPTDFCSQPRKSDSVGPASGKPAVRDLPNHALAISRVLSKISAIPEYENIWQGVFQVHRSGKPPELYTGIQAHLSTCASPKVFEVVNKFLPEISLNEVSRLSTWPSQFNQGGAKEDNIALYFFAKDIESYERHYKGLLDHLIRNDLALKGIFDGFELLIFASNQLPENSQRWNMLFFLWGIFRGRRINHSDSAKKIFIPSLNVMSNENNFPTAVMTLSETRCSPKRMDEEPITCGKFCSALLPSTSVDQGHNMVSRNFDIKETIFDQTHLGSQSQDMRINTKFTPRILTSSSQLCQEINSTGSSQKDTVPAHGQYRESKPPDAVGASVGCRIVETKTDYDISIKQETSLSSGFPSFGNQEIGTACNISKAKISERMNSDENQLRPKSKQIEDLNINMEATFQGDLSVKGTICQQPNDKKVQHIDLSVTVMEASAISCQKMPWNEVNGKLEDGESSSKKLRTGFSYGCHSSGGRDSFNGSFASVANDFGSCSSVEGKGCKEACDEKIIHEDLGTMERTFFPVDTHNKNDSRMVLNSMSLKGPYEYGDQFQVGIPNLELALGGETKPSHKGMLPFFVGAVDKKNNHEKSPDILADEQEDDNVAASLSLSLSFPSSNKEHIKPVSKPEPLPDDGQHVNTSLLLFGRFTDK 1414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 52 70 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 695 715 - -
Gabi102g00038 1414 SMART PHD_3 262 309 IPR001965 -
Gabi102g00038 1414 PANTHER - 261 985 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 461 500 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 543 621 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 1378 1401 - -
Gabi102g00038 1414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 323 IPR013083 -
Gabi102g00038 1414 ProSiteProfiles Zinc finger PHD-type profile. 260 311 IPR019787 -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 409 435 - -
Gabi102g00038 1414 SUPERFAMILY FYVE/PHD zinc finger 250 313 IPR011011 -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 337 378 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 1066 1090 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 543 609 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 199 254 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 52 78 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 213 248 - -
Gabi102g00038 1414 MobiDBLite consensus disorder prediction 337 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00038 Gabi-Chr102 406573 414409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00038 259 320 C2H2 Transcription Factor Family AT3G01460 35.484 4.57e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00038 - - gmx:100784908 1970.67