Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00036 ATGACCAATACCTCAGAGGTTATTACATGCAAAGCTGCCATATGCTGGGGGTTAGGAAAACCTGTAACGGTGGAAGAGATACAAGTAGACCCACCAAAAGCAACAGAAGTTCGAGTTAAGATGCTTTGTGCGAGTTTATGCCATACAGACATCTTAGGCACTCAAGGATTCCCAAGTGGTAATTTTCCTCTAGCACTTGGACACGAAGGAGTTGGTGTTTTAGAGAGTGTCGGTGATCAGGTGACAAATCTGAAAGAAGGTGATATGGTAATTCCAACATACATAGGCGAGTGCCGAGAATGTGTGAATTGTGTTTCAGATAAAACCAATTTATGTCTGACATACCCTTTAAGGTTGAGTGGTCTAATGCCAGATAACACTTCAAGAATGTCCAATATTGGAGGCCAGAGGCTATACCACCTTTTAAGTTGCGCTACATGGTCAGAGTACATGGTTATTGATGCCAACTATATTCTCAAAGTTGATCCAAACATTGATCTAGCCCATGCTAGTTTCATTTCATGTGGGTTTTCAACTGGTTTTGGTGCTGCTTGGAAGGAAGCCAAGGTTGAAAGTGGATCAAGTGTAGCTGTTTTCGGTCTTGGGGCTGTTGGATTAGGGGCTATAAGCGGAGCTAAAATGCACGGAGCAACTAAGATAATTGGGATTGACAAAAATGAGATGAAGAGAAAAAAAGGAGAAGCTTTTGGAATGACTGACTTTATAAATACTGGTGATTCTGCTAAATCTGCTTCAGAATTGGTGAAGGAACTGAGTGGTGGAATGGGTGTGGATTATTCCTTTGAATGCACTGGAGTTGCCCCTTTACTTACAGAATCATTGGAAGCCACAAAAGTGGGAACAGGTAAAGCAATAGCAATTGGCGTAGGATCAGAACCTGTTGTACCGGTTGGAATTCTTCCCATTATATATGGTAGAACTTTGAAAGGTTCTGCTTTTGGAGGGCTAAAAGCCATATCCGACCTTTCCATTATAGCTAACAAATGCCAAAATGAGGAATTCCCTCTTCAAGAACTATTCACTCATGAGGTCCAATTGGCAGATATAAACAAAGCATTTGAGCTATTGAAAGAACCTGATTGTGTGAAAGTTGTCATCAAGTTCTGA 1128 0.4122 MTNTSEVITCKAAICWGLGKPVTVEEIQVDPPKATEVRVKMLCASLCHTDILGTQGFPSGNFPLALGHEGVGVLESVGDQVTNLKEGDMVIPTYIGECRECVNCVSDKTNLCLTYPLRLSGLMPDNTSRMSNIGGQRLYHLLSCATWSEYMVIDANYILKVDPNIDLAHASFISCGFSTGFGAAWKEAKVESGSSVAVFGLGAVGLGAISGAKMHGATKIIGIDKNEMKRKKGEAFGMTDFINTGDSAKSASELVKELSGGMGVDYSFECTGVAPLLTESLEATKVGTGKAIAIGVGSEPVVPVGILPIIYGRTLKGSAFGGLKAISDLSIIANKCQNEEFPLQELFTHEVQLADINKAFELLKEPDCVKVVIKF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00036 375 Gene3D - 180 318 - -
Gabi102g00036 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Gabi102g00036 375 SMART PKS_ER_names_mod 17 373 IPR020843 GO:0016491
Gabi102g00036 375 Pfam Zinc-binding dehydrogenase 203 322 IPR013149 -
Gabi102g00036 375 FunFam alcohol dehydrogenase 1-like isoform X1 18 179 - -
Gabi102g00036 375 Gene3D - 13 370 - -
Gabi102g00036 375 Pfam Alcohol dehydrogenase GroES-like domain 35 161 IPR013154 -
Gabi102g00036 375 SUPERFAMILY GroES-like 4 191 IPR011032 -
Gabi102g00036 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Gabi102g00036 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 334 IPR036291 -
Gabi102g00036 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Gabi102g00036 375 CDD liver_alcohol_DH_like 8 374 - -
Gabi102g00036 375 SUPERFAMILY GroES-like 327 375 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00036 Gabi-Chr102 399701 403089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00036 35 367 Monolignol Biosynthesis Gene Families AT2G21730 27.778 2.16e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00036 K00121 - gmx:100798341 637.491