Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00035 ATGGTTATAAAAAGGAACCGCGACTCCTCTTCTCTTTGCAGAGCAAAGTCTGATTTGTTTGCTTTAATTAGGAACTGTATTATATCTACAATGCCGGGCATTATTACATGCAAAGCTGCCATATGCTTGGGGGTAGGAAAACCCGTGACGGTGGAAGAGATACAAGTAGATCCACCAAAAGCAACCGAAGTTAGAGTTAAGATGCTTTGTGCTAGTGTATGCCACACAGACATTTCAAGCACTCAAGGATTCCCATGTGGTAATTTTCCTCTAGCACTTGGACACGAAGGAGTTGGTGTTGTAGAGACTATTGGTGATCGAGTGACAAATCTGAAAGAAGGTGATGTGGTAATTCCAACATACATAGGCGAGTGCCGAGAATGTGTGAATTGTGTTTCAGAGAAAACCAATTTGTGTCTGACATACCCTGTAAGGTTGAGTGGTCTAATGCCAGATAACACTTCAAGGATGTCCATTCGAGGCCAGAGGCTACACCACGTTTTAAGTTGCGCTACATGGTCAGAGTACATGGTTATTGATGCCAACTACGTACTCAAAGTTGATCCAAACATTGATCTAGCCCATGCTAGTTTCATCTCATGTGGGTTTTCAACTGGTTTTGGTGCTGCTTGGAAGGAAGCCAAGGTTGAAAGTGGATCAAGTGTAGCTGTTTTCGGTCTTGGGGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAAATAATGGGAGCAACCAAGATAATTGGGATTGACAAAAATGAGATGAAGAAAGAAAAAGGAGAAGCTTTTGGAATGACTGACTTTATAAATCCTGGTGATTCTGCTAAATCTGCTTCAGAATTGGTGAAGGAACTGAGTGGTGGAATGGGTGTGGATTATTCCTTTGAATGCACTGGAGTTGGCCCTTTACTTACAGAATCATTGGAAGCCACAAAAGTGGGAACGGGTACAGCAATAGCAATTGGTACAGGATCAGATCCTATTGTGCCGTTTGGTCTTGCTTCTATTATGTATGGTAGAACTTTGAAAGGTTCTGTTTTTGGAGGGCTTAAAGCCATATCAGACCTTTCCATTATAGCTAACAAATGCCAGAAAGAGGAATTTCCGCTTCAAGAACTATTCACTCACGAGGTTCCTTTGGCTGATATAAACAAAGCATTTGAGCTATTGAAGCAACCCAATTGTGTGAAAGTTGTCATCAAGATGTAA 1206 0.4187 MVIKRNRDSSSLCRAKSDLFALIRNCIISTMPGIITCKAAICLGVGKPVTVEEIQVDPPKATEVRVKMLCASVCHTDISSTQGFPCGNFPLALGHEGVGVVETIGDRVTNLKEGDVVIPTYIGECRECVNCVSEKTNLCLTYPVRLSGLMPDNTSRMSIRGQRLHHVLSCATWSEYMVIDANYVLKVDPNIDLAHASFISCGFSTGFGAAWKEAKVESGSSVAVFGLGAVGLGAISGAKIMGATKIIGIDKNEMKKEKGEAFGMTDFINPGDSAKSASELVKELSGGMGVDYSFECTGVGPLLTESLEATKVGTGTAIAIGTGSDPIVPFGLASIMYGRTLKGSVFGGLKAISDLSIIANKCQKEEFPLQELFTHEVPLADINKAFELLKQPNCVKVVIKM 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00035 401 Gene3D - 44 396 - -
Gabi102g00035 401 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 191 359 IPR036291 -
Gabi102g00035 401 Gene3D - 206 344 - -
Gabi102g00035 401 SMART PKS_ER_names_mod 44 399 IPR020843 GO:0016491
Gabi102g00035 401 SUPERFAMILY GroES-like 353 399 IPR011032 -
Gabi102g00035 401 PANTHER ALCOHOL DEHYDROGENASE 34 393 - -
Gabi102g00035 401 FunFam S-(hydroxymethyl)glutathione dehydrogenase 206 344 - -
Gabi102g00035 401 FunFam alcohol dehydrogenase 1-like isoform X1 45 205 - -
Gabi102g00035 401 SUPERFAMILY GroES-like 31 217 IPR011032 -
Gabi102g00035 401 Pfam Alcohol dehydrogenase GroES-like domain 62 187 IPR013154 -
Gabi102g00035 401 CDD liver_alcohol_DH_like 35 400 - -
Gabi102g00035 401 Pfam Zinc-binding dehydrogenase 229 348 IPR013149 -
Gabi102g00035 401 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 94 108 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00035 Gabi-Chr102 393857 397424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00035 62 393 Monolignol Biosynthesis Gene Families AT2G21730 26.686 3.36e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00035 K00121 - gmx:100798341 642.114