Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00034 ATGGCTGCCGCTGATAATACCAACCTAAAGGATTATTACAAAGTTCTGGAGGTTGATTATGATGCAACTGATGAAAATATCAAATTCAATTACCGAAGACTCGCACTGAAATGGCATCCTGACAAGCACAAAGGTGACAGCGCTGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTGAGTGATCCTGCCAAGCGTTTTGACTATGATTTAACTGGGACGTGTGAGATTGAAAAGTATAGCTTGCAGGAATATCTTACCAGATTTAAAGGAATGATCCTAACCTGCAATGGACTTGGTATCAATCATACAGACAGATGGTCACCACAATTAATTGAAAGTTTTGAATCCGTCGACAAATAA 372 0.379 MAAADNTNLKDYYKVLEVDYDATDENIKFNYRRLALKWHPDKHKGDSAVTAKFQEINEAYNVLSDPAKRFDYDLTGTCEIEKYSLQEYLTRFKGMILTCNGLGINHTDRWSPQLIESFESVDK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00034 123 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 107 - -
Gabi102g00034 123 SUPERFAMILY Chaperone J-domain 8 97 IPR036869 -
Gabi102g00034 123 PRINTS DnaJ domain signature 13 31 IPR001623 -
Gabi102g00034 123 PRINTS DnaJ domain signature 48 68 IPR001623 -
Gabi102g00034 123 PRINTS DnaJ domain signature 68 87 IPR001623 -
Gabi102g00034 123 PRINTS DnaJ domain signature 31 46 IPR001623 -
Gabi102g00034 123 Pfam DnaJ domain 11 73 IPR001623 -
Gabi102g00034 123 SMART dnaj_3 10 68 IPR001623 -
Gabi102g00034 123 CDD DnaJ 11 65 IPR001623 -
Gabi102g00034 123 FunFam Chaperone protein DNAj, putative 3 90 - -
Gabi102g00034 123 Gene3D DnaJ domain 2 90 IPR036869 -
Gabi102g00034 123 ProSiteProfiles dnaJ domain profile. 11 76 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00034 Gabi-Chr102 382428 386915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00034 1 73 C2H2 Transcription Factor Family AT1G74250 39.744 7.77e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00034 - - gmx:100305987 228.409