Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00029 ATGCAGCCCCTAACTGCAGCAACTATTGATGGAGAGGGTTGGCTTCATACGGGAGATATTGGTTACGTAGATGATGATGATGATGATGAGATTTTCATTGTTGACAGGCTCAAGGAACTCATCAAATTTAAAGGCTTTCAAGTGCCGCCGGCAGAACTTGAAGGCCTTCTTGTGAGCCACCCTTCTATTGTGGATGCAGCTGTTATCCCACAAATGGATGATGCTGCTGGTGAAGTTCCAGTTGCTTTCGTGGTTAGCTTTGATCTTACTGAAGAAGCTATAAAGGAGTTTATAGCTAAACAGGAAGTGTATTACAAAAGACTACACAGAGTGTACTTTGTTCATGCCATTCCCAAGTCTCCATCCGGAAAAATATTAAGAAAAGACCTCAAAGCAAAGCTGGCAAGCATCACCCAGATGGCCTAG 426 0.4343 MQPLTAATIDGEGWLHTGDIGYVDDDDDDEIFIVDRLKELIKFKGFQVPPAELEGLLVSHPSIVDAAVIPQMDDAAGEVPVAFVVSFDLTEEAIKEFIAKQEVYYKRLHRVYFVHAIPKSPSGKILRKDLKAKLASITQMA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00029 141 SUPERFAMILY Acetyl-CoA synthetase-like 4 136 - -
Gabi102g00029 141 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 132 - -
Gabi102g00029 141 Gene3D - 2 38 IPR042099 -
Gabi102g00029 141 FunFam 4-coumarate--CoA ligase 2 39 137 - -
Gabi102g00029 141 Gene3D - 39 137 IPR045851 -
Gabi102g00029 141 Pfam AMP-binding enzyme C-terminal domain 52 124 IPR025110 -
Gabi102g00029 141 Pfam AMP-binding enzyme 4 43 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00029 Gabi-Chr102 299177 301084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00029 5 136 Monolignol Biosynthesis Gene Families AT4G05160 57.778 7.33e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00029 K01904 - lja:Lj6g3v0933470.1 221.476