Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi102g00022 ATGGCTCCAAAGAAGGAAAAGGCTCCTCCACCTTCCTCCAAGCCCGCCAAATCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAATAACATGGTGCTGTTTGATCAGGGAACCTATGACAAGCTCCTCACTGAAGCACCCAAATATAAACTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCTATAAGAGATTTGATGGCTAAAGGTTCAATCAGGATGGTGTCTTCCCATTCAAGCCAGCAGATTTACACCAGGGCAACAAACACCTAG 327 0.4679 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKYKLITPSILSDRLRINGSLARKAIRDLMAKGSIRMVSSHSSQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi102g00022 108 FunFam 40S ribosomal protein S25 21 108 - -
Gabi102g00022 108 MobiDBLite consensus disorder prediction 1 36 - -
Gabi102g00022 108 Gene3D - 21 108 - -
Gabi102g00022 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Gabi102g00022 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi102g00022 Gabi-Chr102 248055 250104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi102g00022 1 108 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 88.889 7.92e-55 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi102g00022 K02975 - ming:122063087 156.762