Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1028g00021 ATGGAAGAGACCACAAAGAGGGAACAAATTAATCTGATCAATGAACTAATCCAAGGAAAGGAGCTATCTAAGCAGCTCTTTAACCATCTATTCTCTTCTTCTCCTTCATCCCTTGAAACCAATGAATTCTTGATTGAGAAAATAATTTCGTCCTATGAGAATGCACTCACCATGCTGTACTTGGGGTCTAATATGGGAGAGATTAAGACCACCAGGGGCAGCATGATGGATTCCCATTGTTCTTTTACGAATGAGAGCCCCAGAAGTGAGGTCATGGACCATGAATCTAAGCACAAAGCTGTCTACAAGAAAAGAAAGACCATGCCCGTATGGTCAGAGCAAGTGAAGATTGGCTCAAGATCAGGACTTGAGGGGTCTTTTGATGATGGATATAGCTGGAGAAAATATGGTCAGAAGGATATTCTTGGAGCAAAGTTTCCAAGAGGATATTACAGATGCACACGTAGAAATGTACAAGGGTGCCTAGCAACAAAGCAAGTTCAACGGTCAGATGAAGACCCAACAATAATTGAGGTGACCTACAGAGGAAGACATACATGCACACAAGCTAAGCATTTAATCAAGGCATCTCCATCAAAAATAAAGATGAGTTTGGGGGAGAATACTATGCAACAGGCGAAAATAGAGCAAACCCCAGAAGCAATTTTCAAGCATGAAGCTGAGCTTGAAGTTAAGACAGAAGACTTGGAAACCAAGGAGGATATCTTCCCATGGTTTTGCTTTCCTTCTCCATCAGAAAACGAGGACACCATATTATTCGAGACAATGATCGAAAAACATGTAATGGAAAGCTTTTATCCTTCATTCATATCACCAGCAACTTCAGAATCAAACCTTCTATGTTTGTCAGCATACCACTTAGGGAGCACTGGACTTGACCAAAACGTACAAACCTCAGAATCTGATATTACTGAGATAGTTTCAGCCTCAACTTCAGTCACCAATTCTCCAATCCTGGATTTGGATATCTTGCTTCATAAAGGGGATTTCGACACCGATTTCCCTATTAACACCCCTGAATATTTCTTATCATAA 1056 0.4072 MEETTKREQINLINELIQGKELSKQLFNHLFSSSPSSLETNEFLIEKIISSYENALTMLYLGSNMGEIKTTRGSMMDSHCSFTNESPRSEVMDHESKHKAVYKKRKTMPVWSEQVKIGSRSGLEGSFDDGYSWRKYGQKDILGAKFPRGYYRCTRRNVQGCLATKQVQRSDEDPTIIEVTYRGRHTCTQAKHLIKASPSKIKMSLGENTMQQAKIEQTPEAIFKHEAELEVKTEDLETKEDIFPWFCFPSPSENEDTILFETMIEKHVMESFYPSFISPATSESNLLCLSAYHLGSTGLDQNVQTSESDITEIVSASTSVTNSPILDLDILLHKGDFDTDFPINTPEYFLS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1028g00021 351 Gene3D WRKY domain 114 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1028g00021 351 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 296 IPR044810 GO:0003700
Gabi1028g00021 351 SUPERFAMILY WRKY DNA-binding domain 127 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1028g00021 351 SMART WRKY_cls 127 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1028g00021 351 FunFam WRKY transcription factor 53 113 190 - -
Gabi1028g00021 351 ProSiteProfiles WRKY domain profile. 122 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1028g00021 351 Pfam WRKY DNA -binding domain 128 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1028g00021 Gabi-Chr1028 121099 123788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1028g00021 8 243 WRKY Transcription Factor Family AT4G23810 41.729 9.70e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi1028g00021 WRKY 1.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1028g00021 - - gmx:100790050 518.464