Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1028g00019 ATGGAGACCCTCAATGCAGCTGGCTTGACCCCATTATCAGTGCTTTCTGATAGAAGAATAGAACCCCGAAAATTCCTATCACTGCCTACAAATTCCACAAGCAAAGTCTCCAATTTTTCTAGTCTTGGCAACAAGAAACCAGCTCTGCTAGAGTGTTTATCAAAAGGTTTACGTGGGGGTCTATTTCTTGCAGCTTCAGTTGTCAATAATGGACTTTCTAGAGCTCTAACGTATGAGGAGGCATTGGGGCAATCTGTGAGTGCTCCTAGTTCTGGGGACTTCGATGCAAATGTGTTTATAGATAGTGTTATCAGTTTTGGAACAGAGAACCCAGCTATTATAGCCGGAGGAGTAGCTATTTTGGCTGTGCCACTGGTTTTGTCTCAGTTTCTGAAGAAGCCTAAGCCATGGGGAGTTGAGTCAGCCAAAAATGCATATGCAAAACTGGGTTCTGATAAGAATGCTCAGTTGCTTGATATAAGAGCACCTGTAGAATTTAGGCAAGTGGGTACCCCTGATGTTGGAGGTTTGAGGAAGAAGCCAGTGTCAATCACTTACAAGGGTGATGATAAGCCAAGGTTCCTGCAGAGACTTTCTTTGAAGTTCAAGGAACCAGAGAATACCACATTGTTCATTCTGGACAAATTTGATAAGAACTCCGAACTGGTTGCAGAGTTGGTCACCATTAATGGATTTAAGGCTGCTTATGCAATTAAGGATGGTGCAGAAGGACCACGAGGATGGATGAATAGTGGGCTTCCCTGGACACCACCAAGGAAAGCATTGAGTTTGGATTTTGGCAATTTGACAGATGCTATCTCTGGCACAATAGGAGAGACCTCTGATGGCTTGGCTATTACTCTTGGGATTGCTGCGGCTATTGGACTCGGTGTATTAGCTATTTCTGAGATAGAAACAATTCTCCAACTTTTAGGATCAGTTGCACTTATTCAGTTTGCAGGCCAGAAGCTTCTATTTGCTGAGGACCGAAAGCAAACACTACAGCAAGTTGATGAGTTCTTGAACACCAAGGTTGCCCCTAAAGATCTTGTCGATGAAATAAAGCAAATTGGAAAGGCTCTTCTACCAAGCTCCACAAATAATAAGGCTCTTCCCGCCCCAATAGATAAAAGCCCAGAGCCTGCTACAGCAGATTGGACTGTACAGAAAGCAGAAGCTACTCCTGATTCCATCTCCAAGTTCAAAGTAGATGCTGTAACAGGACCTGCTCCTGAAATAAATTCGGTACCAAACACTGAAGTTATGGCAGAATCACTTCCGGGGTTATTAAAACCACTTTCACCATACCCATACTATTCAGATTTCAAGCCTCCTACATCTCCCACCCCTGCACAGCCCTAG 1362 0.4391 METLNAAGLTPLSVLSDRRIEPRKFLSLPTNSTSKVSNFSSLGNKKPALLECLSKGLRGGLFLAASVVNNGLSRALTYEEALGQSVSAPSSGDFDANVFIDSVISFGTENPAIIAGGVAILAVPLVLSQFLKKPKPWGVESAKNAYAKLGSDKNAQLLDIRAPVEFRQVGTPDVGGLRKKPVSITYKGDDKPRFLQRLSLKFKEPENTTLFILDKFDKNSELVAELVTINGFKAAYAIKDGAEGPRGWMNSGLPWTPPRKALSLDFGNLTDAISGTIGETSDGLAITLGIAAAIGLGVLAISEIETILQLLGSVALIQFAGQKLLFAEDRKQTLQQVDEFLNTKVAPKDLVDEIKQIGKALLPSSTNNKALPAPIDKSPEPATADWTVQKAEATPDSISKFKVDAVTGPAPEINSVPNTEVMAESLPGLLKPLSPYPYYSDFKPPTSPTPAQP 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1028g00019 453 Gene3D - 137 267 IPR036873 -
Gabi1028g00019 453 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 135 266 - -
Gabi1028g00019 453 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 453 IPR044240 -
Gabi1028g00019 453 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 137 257 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1028g00019 Gabi-Chr1028 100471 104977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1028g00019 1 374 Sulfurtransferasese or Rhodanese AT4G01050 64.721 2.58e-157 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1028g00019 K17525 - qsa:O6P43_017753 628.246