Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1024g00018 ATGGCGAATCCTGAAACTCAACGTCAGCCTCACCGGTCCAAAGCTCGACCGTCGTCATCAAAGGCTCGACCGTCAACATCAAAGTCTCGACCATCAACATCGAAGGCTAAACCGCCGGTTCAGGCTAGGGTTCCGCTGAGGCTGTTGCTTCGGGTAGCGTCAGTGGCTGGTGGCATTCAGTTTGGCTGGGCCTTGCAGTTATCGCTTCTCACGCCGTACGTGCAGCAGCTCGGGATCCCGCACGCGTGGGCCAGCATCATATGGCTCTGCGGCCCGCTCTCTGGGCTTCTGGTTCAGCCCCTGGTGGGCCACATGAGCGACCGGTGCACCAGCCGGTTCGGGCGCCGGAGACCGTTCATATTAGTCGGAGCAGTGGCGATTGTCATCTCTGTTCTGTTAATTGGTCACGCCGCGGACATTGGGTGGTGGTTTGGCGACACCGAGAACCATCGGCAGTACGCTGTGGCCGTTTTTGTGTTCGGGTTTTGGATTTTGGACGTGGCTAACAACGTTACTCAAGGTCCTTGTAGAGCTTTGCTTGGCGATCTTACTGGCAAGGATCATCGAAGGACACGTGTTGCAAATGCTTATTTTTCCCTGTTTATGGCTATTGGTAACATTCTTGGTTATGCATCCGGATCCTATAGTGGTTGGTACAAGGTCTTTTCTTTCACACTTACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCAGCTTTCTTTCTCGACATTGGTTTCATTGCCCTCACCACCTATATCAGCATCGTGGCAGCTCATGAAGTGCCTCTAGGTTCAAGTGGGGCACACTCAGCAGGGGAGTCAGGTAGCGCAGAAGAAGCTTTCCTGTGGGAGCTATTTGGGACATTCAGATATTTTTCAAAATCTATATGGACAATACTGTCTGTTACTGCTCTAACATGGATTGGGTGGTTTCCATTTCTTCTATTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAGCCAAATCAAGGCCCTAATTATGATACTGGAGTTAGGATGGGAGCGCTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAATAACATCAGTGCTCATGGAAAGGCTATGTAGGAAGCGGGGAGCTGGGTTTGTGTGGGGAATCTCAAATATCCTGATGGCTGTCTGCTTTATTGCAATGCTTGTAGTAACCTATGTGGCAAACAAAATTGGCTATGTAGGCAAAGATCTACCACCGTCCGGCATTGTTATGGCTGCATTGACAATCTTTACCATTCTTGGGTTTCCACTGGCAATCACTTACAGTGTTCCATATGCATTAATTTCCACGCATATTCAGTCACTGGGGCTTGGCCAAGGATTGTCAATGGGAGTCCTAAACCTTGCAATAGTGATCCCGCAGGTTACTGCACAGGTCCGAGAAAAAGGGTGCACCACATCTGAAGCTTAG 1437 0.4941 MANPETQRQPHRSKARPSSSKARPSTSKSRPSTSKAKPPVQARVPLRLLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLLVQPLVGHMSDRCTSRFGRRRPFILVGAVAIVISVLLIGHAADIGWWFGDTENHRQYAVAVFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYASGSYSGWYKVFSFTLTPACNISCANLKSAFFLDIGFIALTTYISIVAAHEVPLGSSGAHSAGESGSAEEAFLWELFGTFRYFSKSIWTILSVTALTWIGWFPFLLFDTDWMGREIYGGEPNQGPNYDTGVRMGALGLLLNSVVLGITSVLMERLCRKRGAGFVWGISNILMAVCFIAMLVVTYVANKIGYVGKDLPPSGIVMAALTIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVIPQVTAQVREKGCTTSEA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1024g00018 478 FunFam Sucrose transporter SUC2 47 266 - -
Gabi1024g00018 478 SUPERFAMILY MFS general substrate transporter 47 461 IPR036259 -
Gabi1024g00018 478 NCBIfam sucrose/proton symporter 44 468 IPR005989 GO:0005886|GO:0008515|GO:0015770
Gabi1024g00018 478 MobiDBLite consensus disorder prediction 19 36 - -
Gabi1024g00018 478 Pfam MFS/sugar transport protein 64 210 - -
Gabi1024g00018 478 CDD MFS_SLC45_SUC 49 466 - -
Gabi1024g00018 478 Gene3D MFS general substrate transporter like domains 46 468 IPR036259 -
Gabi1024g00018 478 PANTHER SUGAR TRANSPORTER 43 466 - -
Gabi1024g00018 478 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1024g00018 Gabi-Chr1024 181196 189514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1024g00018 1 468 Sucrose Transporter Gene Family AT1G09960 70.362 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1024g00018 K15378 - gmx:100787939 751.895