Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1023g00022 ATGATGATGACGATGATGGGAGTGTGTGAGAGTAGCGGCGGTGAGGAAGAGATAAGGGCGACGAAGAAAAGAGCGGAGACATGGGTGCAGGAAGAGACGCACACTCTCATTGGCCTCCGTCGTGAGATGGACGCGCTTTTCAACGCTTCCAAGTCCAACAAGCACCTTTGGGAACACATTTCATGCAAGATGCGCGACAAGGGTTTCGATCGATCCCCGACCATGTGCACCGACAAGTGGAGGAACCTCCTCAAGGAGTTTAAGAAAGCCAAACACCATGACTCCGACACCGACATTCTCGGAAATGGTTCCGCCAAGATGTCTTGTTATTACAACGACATTGACGACATACTCAGCGAGAGGACCAAGTCCCTTCACTACAACACCAAACTTGATTCTTTTTTGCACTTCCCAGATAAAGCTATTGAGGATACCAGCCTCTCTTTTGGGCCTGTTCAAGCTACTGGAAGACCAACTCTCAACCTCGAGAGAAGTTTGGATCATGACAGACATCCTCTTGACATTACCACAGCTGATGCTGTCGCAGCTAGTGGGGTTCCTTCATGGAATTGGAGAGAAACTACTGTAAATGGTGAGGAAGGTCAGTCTTGTTGCGGAAGGGTTATATCAGTCAAATGGGGCGATTATACGAGAAAGATAGGTATTGATGGTGCTTCAGAAGCCATCAAGGAGGCAATTAGGGCTGCTTTTAGGTTGAGGACGAAACGTACATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGTTTTGACCGTGACATGCCTTTAGGAAATTACACTCTTCACCTTGATGAAGGAATGACCATTAAAGTATGCCTCTATGATGAGCCTGACCATATCCCTGTGCATACTGAAGAGATCTTTTACACTGAAGATGATTATCGTGATTTTCTAACCCGCCGGGGTTGGACTTGTCTAAGGGAATTTGATGGCTATAGAAATGTTGATAATATGGATGATCTTCGACCTGGTGCTATATACCGAGGGGAAAATGGACGAGGCCGTGTGCTCCAATCAGTTGCCTCGACATCTACATGTCTGTAA 1065 0.4657 MMMTMMGVCESSGGEEEIRATKKRAETWVQEETHTLIGLRREMDALFNASKSNKHLWEHISCKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHHDSDTDILGNGSAKMSCYYNDIDDILSERTKSLHYNTKLDSFLHFPDKAIEDTSLSFGPVQATGRPTLNLERSLDHDRHPLDITTADAVAASGVPSWNWRETTVNGEEGQSCCGRVISVKWGDYTRKIGIDGASEAIKEAIRAAFRLRTKRTFWLEDEDQIIRSFDRDMPLGNYTLHLDEGMTIKVCLYDEPDHIPVHTEEIFYTEDDYRDFLTRRGWTCLREFDGYRNVDNMDDLRPGAIYRGENGRGRVLQSVASTSTCL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1023g00022 354 CDD GT1 26 91 - -
Gabi1023g00022 354 Gene3D - 28 90 - -
Gabi1023g00022 354 ProSiteProfiles Myb-like domain profile. 20 84 IPR001005 -
Gabi1023g00022 354 FunFam trihelix transcription factor GT-1 28 90 - -
Gabi1023g00022 354 Pfam Myb/SANT-like DNA-binding domain 27 116 IPR044822 -
Gabi1023g00022 354 PANTHER FI21293P1 16 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1023g00022 Gabi-Chr1023 183829 187460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1023g00022 8 336 Trihelix Transcription Factor Family AT3G25990 64.912 8.33e-162 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi1023g00022 Myb_DNA-bind_4 2.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1023g00022 - - ccaj:109807736 546.199