Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1023g00017 ATGGAAATGGAATTAATATCCAGAGAATTCATCAAACCCTCTACACCTACACCTTCTCACCACAGAATCCATCCCCTCTCTTTCATAGATCATATAGTTGCTCGTAACTACGTGCCAGTAGTTTACTTCTACACAAACGAGGGCTCTGAAAATGATGATAATAACCAAGGATCCAAAATATCAATGCTCAAGAAATCCTTATCTGAAGTTCTATCCATATACTACCTTCTTGCTGGTAGGTTCAGAGATAAAACTTCCATTGATTGCAACGACCAAGGGGTGTTATTGCTGGTCACAAGGATCAGAAGCAAGCTATCTGAGATCCTCCACAACCCCATTAATGAAGCAATATTGAACCCTTTGTTCCCAGATGAATTGCAGTGGAAGGACATGGGTTCAAGTGCAAGTATAGTTGCCATTCAAATCAACTCTTTCGAATGTGGAGGAATAGCTATCAGCGTGTGTATGTCTCACAAAGTTGGTGATGCTTCCGCTCTTTTCAACTTTGTCAATGACTGGGCCATCATGAACCGAAAATCTAGTGATGAAGAAGGAGAGTTATTAATACCCTCCCCTGTGCTTGATGCTGGAGCTTCATTATTCCCACATGGGGATTTACCAGATTTACCTGAAACTCTGTTTATGTTACGAAACACTGTATGCAGAAGGGTTGTGTTTGAAGCCTCGAAGATCGAGTCCCTCAAGGCAATGGTTTCATCTCACAATAAGGTGGAAAACCCTTCACGTGTTGAAGTTGTTATTGCACTAATTTACAAGCGTGCAGTTTCTGCTTTGAGATTAAATAACAACACACTTTTGCGAGTTGCTGCAAACCTCCGCAGAAGAATGGTTCCTCCACTTCCTGATAAGTCTATAGGTAACTGGGTTTGGTCCTTTCCTGTGTCCTGTGACACAGGGGAAGCAGAGTTGCATGATTTGGTGAGCAAAATGAGAGAAGGGTTATCAGAGTTTTGTGACAAAAATGTGAAAAACTTTGGGGATTTTTCATTTGTGTGTGAGTTCTTAAAACAAGCTACTTCTTTACCAAAACCAAAAGAAACAAGTTCAAATGCTTCTAACCAGGTGAAGCCTTTAGCTATGTTTTTCTTTGCGAGCTGGTGTAGGCTCCCAACCTATGAAGTGGACTTTGGGTGGGGTAAGCCAATATGGGTGACAAGTATTGGTTCTCCAGTGAAGAATAGTGTAGTTTTGATGGATACAAAAGATGGGAATGGGATTGTAGCGCTTGTGAATATGGATGAGCAAGACTTGGCCATATTTGAACGTGATGTGGAGCTCCTTCAATATGCATCTCTTAATTAG 1323 0.4127 MEMELISREFIKPSTPTPSHHRIHPLSFIDHIVARNYVPVVYFYTNEGSENDDNNQGSKISMLKKSLSEVLSIYYLLAGRFRDKTSIDCNDQGVLLLVTRIRSKLSEILHNPINEAILNPLFPDELQWKDMGSSASIVAIQINSFECGGIAISVCMSHKVGDASALFNFVNDWAIMNRKSSDEEGELLIPSPVLDAGASLFPHGDLPDLPETLFMLRNTVCRRVVFEASKIESLKAMVSSHNKVENPSRVEVVIALIYKRAVSALRLNNNTLLRVAANLRRRMVPPLPDKSIGNWVWSFPVSCDTGEAELHDLVSKMREGLSEFCDKNVKNFGDFSFVCEFLKQATSLPKPKETSSNASNQVKPLAMFFFASWCRLPTYEVDFGWGKPIWVTSIGSPVKNSVVLMDTKDGNGIVALVNMDEQDLAIFERDVELLQYASLN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1023g00017 440 Gene3D - 1 209 IPR023213 -
Gabi1023g00017 440 Gene3D - 217 437 IPR023213 -
Gabi1023g00017 440 Pfam Transferase family 2 433 - -
Gabi1023g00017 440 PANTHER F21J9.9 4 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1023g00017 Gabi-Chr1023 146898 148220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1023g00017 1 429 Monolignol Biosynthesis Gene Families AT5G48930 23.593 3.20e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1023g00017 - - gmx:100806928 513.072