Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1023g00016 ATGGAAATGGAATTAATATCTAGAGAAACCATCAAACCCTCTGCATCCACCCCTCCTTCCCTCACTAATTATCCTCTCTCCCTGATAGATAATATCGTTGCTCCAAATTCAGTGCCATTACTTCACTTTTATCCAAACAAAAGCTGTGAACATGATTCTTATGATGCCCCAGGCCAAGTTTATGACCAAGGATCCAAAATATTAATGCTCAAGAAATCCTTATCTAAAGTTTTACACATATACTACCCAGTTGCTGGTAGGTTGAAAGATAAACGTTCCATTGACTGCAACGACCAAGGGGTGTCATTGCTTGTCACCAGGTTCAAATGCAAGCTATTTGTGGTTGCTCAGAACCCCAGTGAAGCATTGCTGAACCCTTTATTCCCTGATGAGTTGAATTGGAAGGACATGGGTTCAAGTTCAAGTTTAGTGGCTATTCAAATCAACTGTTTTGAATGTGGGGGAATGGCAATCAGTGTGTGTATGTCTCACAAGGTTGGTGATATTTCCACTCTCTTCAACTTCATCAATGACTGGGCCAACTTGAACAGATTTGAAGAAGGAGAATTAACTTTCCCAGTGTTTGATGTAGGAGCTTCAATGTTCCCACAAGGGGACTTGCCAGTTTTACCAGAATTTGTGTTTGTGAAACAGAACACAGCATGCAGAAGGCTTGTGTTTGATGGGTCGAAGATTGAGTCCCTTAAGGCTATTGTATCATCCCACCAGGTGGAAAATCCTACGCGTGTTGAAGTTGTTATTGCACTTATTTACAAGTGTGCTGTTTCTGCTTTGAGACTAAATAACAACACACCTTTGCTTGTTACTATCAACCTCCGCAGAAGAATGGTTCCTCCACTTCCTGACAAGTCTATTGGAAACTTGGTTTGGAGCTTCAGCGCTTCCAACCAATGCATGGAACACGAGAGGGAAATGGAATTACATGATTCGGTAAGCAAAATGAGAGAAGGGTTATCTGAGTTTTGTGACAAAAATGTGAAAAACTTTGGGGATTTTTCATTTGTGTATGAGTTCCTAAAAAAAGTTACTTCTTTCCTAGAGAAGAAAAAACAAGCAAGTTCAACTTCAGTGTCCCCTGATAAGGAGAAGGAAAGTTCATTCTTTTTTGCCAGCTGGTGCAGATTCCCAATTTATGAAGCGGATTTTGGGTGGGGCAAGCCAATATGGGTGACAACTAGTGGCTGCTCCGCGAGGAATAGCATAATTTTAATGGACACAAGAGATGGGGATGGGATTGAAGCGCTTGTGTTCATGGAAGAGAAAGACATGGTCATGTTTGAGCGTGATGTGGAGCTTCTTCAATATGCCTCTCTTAGTCCAAACCGATGGACATGCTAA 1359 0.415 MEMELISRETIKPSASTPPSLTNYPLSLIDNIVAPNSVPLLHFYPNKSCEHDSYDAPGQVYDQGSKILMLKKSLSKVLHIYYPVAGRLKDKRSIDCNDQGVSLLVTRFKCKLFVVAQNPSEALLNPLFPDELNWKDMGSSSSLVAIQINCFECGGMAISVCMSHKVGDISTLFNFINDWANLNRFEEGELTFPVFDVGASMFPQGDLPVLPEFVFVKQNTACRRLVFDGSKIESLKAIVSSHQVENPTRVEVVIALIYKCAVSALRLNNNTPLLVTINLRRRMVPPLPDKSIGNLVWSFSASNQCMEHEREMELHDSVSKMREGLSEFCDKNVKNFGDFSFVYEFLKKVTSFLEKKKQASSTSVSPDKEKESSFFFASWCRFPIYEADFGWGKPIWVTTSGCSARNSIILMDTRDGDGIEALVFMEEKDMVMFERDVELLQYASLSPNRWTC 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1023g00016 452 Pfam Transferase family 2 439 - -
Gabi1023g00016 452 Gene3D - 218 444 IPR023213 -
Gabi1023g00016 452 Gene3D - 1 209 IPR023213 -
Gabi1023g00016 452 PANTHER F21J9.9 4 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1023g00016 Gabi-Chr1023 135927 137285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1023g00016 1 435 Monolignol Biosynthesis Gene Families AT5G48930 25.470 9.81e-29 115