Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1023g00015 ATGGAAATGAAATTAATATCTAGAGAAACCATCAAACCCTCTGTACCCACTCCACCTCACCTCAGAATTTATCCACTCTCATTCATAGATCACATCGTTTTTCGTAATTATGTGCCAACAGTTTTCTTTTACTCCCCAAACGAGTGCCATGAATGTGATGATGATCCTCAACTTTGTGACCAAACATCCAAAATATCATCTCTCAAAAAATCCTTATCTGAAGTTCTATCTAGATACTACCCTTTTGCAGGAAGGTTCAGAGATCAACTTTCCATTGATTGCAACGACGAAGGGGTGTCATTGCTGGTCACAAGGATCAGAATAAAGCTATCAGAGATCCTTCAGAACCCCAAAGAAGCATTTCTGAACCCTTTATTCCCTGATGAATTGCAATGGAAGGATATGAGTTCAAGTGCAAGTTTAGTAGCCGTTCAAATCAACTCTTTTGCATGTGGTGGCATGGCAATCAGTGTGTGTATGTGTCACAAAGTTGGTGATGCTTCCACACTCTTCAACTTCGTCAATGACTGGGCCACCATGAATCGAGATAACTCTCATGAAGCAGAGTTATTATTACCTTACCCTGCACTTGATGCAGGAGTTTCAATATTCCCACAAGGTGACTTACCTGTTTTCCCAGAAGTTTTGTTTGTGAAAGACAACACTGTATGCAGAAGGTTTGTGTTCAAAGCTTCGAAGATTGAGTCCCTCAAAGCCATGGTATCATCACACAAGGTGAAAAATCCAACGCGTGTTGATGTTGTCACTGCACTGGTTTACAAGTGTGCAGTTTCTGCTTTGGGGTTAACTTTCAAGACAACATCGTTCCGCATTGCTGTTAACCTTCGCAAGAGAATGGTTCCTCCACCGCATGAGAAGTGCGTTGGGAACATGGTTTGGTTCGTGTTTGTGTTTAACCCTTTCATTGGAAAGAGGGAAACAGAACTACATGACTTGGTGAGCAAAGTGAAACAAGGGTTATCTGAGTTTTGTGAAATATGTGCTAAAAAGTTTGGAGGGAAGGACTTGTCGTTTATCTCTGAGTGTCTAAAACAAGCTACCTCAGGTCCTTCAGAGCCTTGTGATTCTGATGAGGAGACTCAAACTTTGTTTTGTTATGCAAGCTGGTGCAGATTCCCAATGTACGTGGCAGATTTTGGGTGGGGGAAACCAATATGGGTGACAACTAGTGGTTGCCCTGTGAGGAATAGCATAGTTTTGATGGATACAAGAGATGGGGATGGGATTGAAGCGCTTGTGAACATGGAAGAGCATGACATGGTCATGTTTGAGCGTGATGTGGAGCTTCTTCAATATGCCTCTCTTAAAGAAGAAATATCGAGTCTGCTAAGTTAG 1356 0.4204 MEMKLISRETIKPSVPTPPHLRIYPLSFIDHIVFRNYVPTVFFYSPNECHECDDDPQLCDQTSKISSLKKSLSEVLSRYYPFAGRFRDQLSIDCNDEGVSLLVTRIRIKLSEILQNPKEAFLNPLFPDELQWKDMSSSASLVAVQINSFACGGMAISVCMCHKVGDASTLFNFVNDWATMNRDNSHEAELLLPYPALDAGVSIFPQGDLPVFPEVLFVKDNTVCRRFVFKASKIESLKAMVSSHKVKNPTRVDVVTALVYKCAVSALGLTFKTTSFRIAVNLRKRMVPPPHEKCVGNMVWFVFVFNPFIGKRETELHDLVSKVKQGLSEFCEICAKKFGGKDLSFISECLKQATSGPSEPCDSDEETQTLFCYASWCRFPMYVADFGWGKPIWVTTSGCPVRNSIVLMDTRDGDGIEALVNMEEHDMVMFERDVELLQYASLKEEISSLLS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1023g00015 451 Coils Coil 439 451 - -
Gabi1023g00015 451 Gene3D - 219 441 IPR023213 -
Gabi1023g00015 451 Pfam Transferase family 3 436 - -
Gabi1023g00015 451 Gene3D - 1 210 IPR023213 -
Gabi1023g00015 451 PANTHER F21J9.9 4 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1023g00015 Gabi-Chr1023 124861 126216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1023g00015 1 432 Monolignol Biosynthesis Gene Families AT5G48930 23.377 2.84e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1023g00015 - - gmx:100806928 608.986