Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1020g00005 ATGGAGTCTACAAAATGCAATGAACCAAGTCCACTCGGCAAGATGATAGTCGTTGCATCCATCGCCGCTGGTATACAATTCGGGTGGGCCCTTCAACTCTCCCTGTTGACACCATATGTTCAGCTGCTCGGTGTCCCACACATGTGGGCCTCCTTCATCTGGCTCTGTGGGCCCATATCCGGCTTGGTCGTTCAGCCTATCGCCGGTTACTACAGCGATCGTTGCACCTCCAGATTCGGCCGCCGCCGTCCCTTCATCTTCTTTGGCTCCCTCGCCGTCGCAATCGCTGTATTCCTCATTGGCTTCGCCGCCGACCTTGGTTACTCATTCGGCGACGACCTCACCAAAAAAACCCGCCCACGCGCCGTTGCAATCTTCGTCATCGGCTTCTGGATCCTCGACGTGGCTAACAACATGTTGCAAGGACCATGCCGCGCTTTCCTCGGCGACCTCTCCGCCGGCGACTACAAGAAAATTAGAGTCGGAAATGCCTTGTTCTCATTCTTCATGGCCGTCGGCAATGTCCTCGGTTACGCCGCCGGATCCTACAGCGGCCTCCATAAAATCTTCCCCTTCACACAAACCAAAGCATGTGACGTGTTCTGCGCTAACCTCAAGACTTGTTTCTTCTTCTCCATCTTTCTTCTCCTTGTCCTCGCTGTGATCGCTCTCGTTGTCGTGCATGACGCACCAATTAACCCACGTGATCACAATGTCGTCGACGAAGAAGAAACAGCTTCATCATCATGCTTTGGTCGATTAATATGCGGTGCATTTAAGGAACTCAAGAAGCCAATGTGGATGCTCATGTTGGTGACAGCTATCAACTGGATTGCATGGTTCCCTTACTTCTTGTTCGACACTGATTGGATGGGTCGTGAGGTGTACGGTGGTGATGCCGGTGATGCTGCATATGGCGCTGGTGTCCGCGCTGGTTCATTGGGTCTAATGATTAACGCTGTCGTTTTGGGTTTCATGTCTTTGGCTATTGAGCCATTGGGTAAAATGCTTGGTGGTGTTAAGAGGCTGTGGGCTACTGTGAACTTCATTCTCGCAATTGGCATGGCAATGACTGTTGTTATCTCCAAACAAGCTGAGCACGAACGCCATGTTGGCCTCCATGTCGCAGGGTCACCCTCTGAGGCTGTTAAGGCTGGTGCCTTGGCTTTCTTTGGTGTTCTTGGTATCCCTCTTGCGATTACTTTCAGCGTTCCTTTTGCTCTGGCATCAATCTACTCGAGCGCTACAGGAGCAGGCCAAGGTTTGTCTTTGGGAGTCCTCAATCTTGCCATCGTCATTCCACAGATGATTGTTTCAGCACTGAGTGGACCTTGGGATAACTTGTTCGGTGGTGGCAATTTGCCAGCTTTCGTGGTGGGTGCAGTGGCTGCTGTCGTGAGTGCTATAATGGCAATTGTCCTGTTGCCTACACCAAAGGCAGAAGATGAGGCCAAGGCTTCAACCGTTGCCACTGGGAGCTTCCATTAA 1488 0.5175 MESTKCNEPSPLGKMIVVASIAAGIQFGWALQLSLLTPYVQLLGVPHMWASFIWLCGPISGLVVQPIAGYYSDRCTSRFGRRRPFIFFGSLAVAIAVFLIGFAADLGYSFGDDLTKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLSAGDYKKIRVGNALFSFFMAVGNVLGYAAGSYSGLHKIFPFTQTKACDVFCANLKTCFFFSIFLLLVLAVIALVVVHDAPINPRDHNVVDEEETASSSCFGRLICGAFKELKKPMWMLMLVTAINWIAWFPYFLFDTDWMGREVYGGDAGDAAYGAGVRAGSLGLMINAVVLGFMSLAIEPLGKMLGGVKRLWATVNFILAIGMAMTVVISKQAEHERHVGLHVAGSPSEAVKAGALAFFGVLGIPLAITFSVPFALASIYSSATGAGQGLSLGVLNLAIVIPQMIVSALSGPWDNLFGGGNLPAFVVGAVAAVVSAIMAIVLLPTPKAEDEAKASTVATGSFH 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1020g00005 495 Gene3D MFS general substrate transporter like domains 13 475 IPR036259 -
Gabi1020g00005 495 PANTHER SUGAR TRANSPORTER 14 474 - -
Gabi1020g00005 495 CDD MFS_SLC45_SUC 15 454 - -
Gabi1020g00005 495 SUPERFAMILY MFS general substrate transporter 16 480 IPR036259 -
Gabi1020g00005 495 NCBIfam sucrose/proton symporter 11 480 IPR005989 GO:0005886|GO:0008515|GO:0015770
Gabi1020g00005 495 Pfam MFS/sugar transport protein 24 280 - -
Gabi1020g00005 495 FunFam Sucrose transport protein 9 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1020g00005 Gabi-Chr1020 120696 123013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1020g00005 7 495 Sucrose Transporter Gene Family AT1G71880 65.992 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1020g00005 K15378 - gmx:100784153 715.301