Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1013g00006 ATGGCTGCAATACCTACTCATGTGAAAGCTTGGACATACTCCGAATATGGTCCCTCCGCTGATGTTCTCAAGTTTAATCAGAGTGTGCCTTTACCTGAGTTGAAGCCTGATCAAGTACTCATCAAGGTTGCTGCTGTTTCCCTTAATCCTCTTGATTATAAGAGAATGGCTGGTGGTTTCAAGGACACTGATTCCCCTTTACCTACTGTTCCTGGGTATGATGTTGCTGGAGTGGTGGTGAACGTGGGAAGCCAAGTGAAGAAATTTAAGGTTGGGGATGAAGTTTATGGTGATATCAATGAGAAAGCTTTGGAATATCCAAAGGTAATGGGTTCTTTGGCAGAGTATACTGCTGCTGAAGAGAAACTATTGGCTCACAAGCCACAGAATCTGAGCTTTGCTGAGGCTGCTAGCCTTCCTTTAACAATTGAGACTGCTTATGTAGGACTTGAGCTAGCTGGGTTTTCTGCTGGCAAATCTATCCTTGTTCTCGGAGGTGCTGGTGGAGTTGGAAGCCATGTTATTCAGCTTGCCAAGCATTTTTATGGTGCATCCAAGGTAGCAGCTACATCTAGCACTGGGAAACTTGAATTGTTGAGGAAATTGGGAGCTGACTCGCCTATTGATTATACAAAGGAGAATTTTGAAGACTTGCCTGAAAAGTTTGATGTGGTGTATGATGCAGTAGGGCAAACTGAGAGGGCATTCAAGGCTCTTAAAGAAGGAGGCAAAGTTGTGACAATAGTACCACCTGGATTTCCACCAGCTATATTTTTCATACTCACTTCTGATGGGTCTATCTTAGAGAAACTAAGATCCCACTTGGAGAGTGGAAAGGTGAAGCCAATACTCGACCCCAAGAGCCCCTTTCCATTTTCTCAGACAATTGAAGCATTTTCCTATCTGGAAACTAACAGAGCCACTGGAAAAGTAGTCATCCATCCCATATAA 951 0.4364 MAAIPTHVKAWTYSEYGPSADVLKFNQSVPLPELKPDQVLIKVAAVSLNPLDYKRMAGGFKDTDSPLPTVPGYDVAGVVVNVGSQVKKFKVGDEVYGDINEKALEYPKVMGSLAEYTAAEEKLLAHKPQNLSFAEAASLPLTIETAYVGLELAGFSAGKSILVLGGAGGVGSHVIQLAKHFYGASKVAATSSTGKLELLRKLGADSPIDYTKENFEDLPEKFDVVYDAVGQTERAFKALKEGGKVVTIVPPGFPPAIFFILTSDGSILEKLRSHLESGKVKPILDPKSPFPFSQTIEAFSYLETNRATGKVVIHPI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1013g00006 316 CDD MDR_like_2 9 313 - -
Gabi1013g00006 316 SMART PKS_ER_names_mod 19 313 IPR020843 GO:0016491
Gabi1013g00006 316 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 158 179 IPR002364 GO:0008270|GO:0016491
Gabi1013g00006 316 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 283 IPR036291 -
Gabi1013g00006 316 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 316 IPR044626 GO:0016628
Gabi1013g00006 316 Pfam Alcohol dehydrogenase GroES-like domain 36 98 IPR013154 -
Gabi1013g00006 316 SUPERFAMILY GroES-like 5 165 IPR011032 -
Gabi1013g00006 316 Gene3D - 150 264 - -
Gabi1013g00006 316 Gene3D - 15 313 - -
Gabi1013g00006 316 Pfam Zinc-binding dehydrogenase 202 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1013g00006 Gabi-Chr1013 182921 186031 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1013g00006 48 254 Monolignol Biosynthesis Gene Families AT4G37980 25.483 1.74e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1013g00006 K18980 - gmx:100817947 501.516