Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1009g00014 ATGGAAACTATTAGACGCTGGTTTAGTAAGTTCAAGTCAAATGATAAAATGAAATCTGCAAAAAATAAGGAAACTACAGGCATGGCAAAAGAAGGGTCAAAACCCCCAACAAATGTGGAAGCACCTTCAAATATAACGAAACAGAAGGTTGAAGCTGCGAAGCAATATATAGAAAATCATTATAAGAAGCAGATGCAGGGCCTGCAAGAGAGGAAGGAAAGACGTAATATGCTAGAAAAAAAGTTGGCTGACGCTGAAGTCTCTGAGGAAGAGCAGAGCAACTTGCTTAAATATTTGGAAAAAAAGGAAACCGAATACATGCGCCTTCAGAGACTTAAGATGGGGGCCGATGACTTTGAGCCGCTGACTATGATTGGGATGGGTGAATTTGGAGAGGTTAGAGTCTGTCGAGAAAAGGTAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAGTCAGAGATGCTCCATAGAGGCCAGGTTGAACATGTCAAAGCTGAGAGGAACCTACTTGCAGAAGTTGACAGCAACTGCATTGTAAAACTTTATTGTTCATTTCAAGATGAAGAGTATTTATATCTCATAATGGAGTATCTACCTGGTGGAGATATAATGACGTTGTTGTTGCGGAAAGAAATATTGACAGAAGATGAAGCCAAGTTCTATGTTGGGGAGACTGTCCTAGCCATAGAGTCAATTCATAAACATAATTATGTTCATAGAGACATCAAGCCTGACAGCTTGCTGTTAGATAGAAATGGTCACATGAAATTGTCAAATTTTGGATTATGCAAACTGCTAGACTGCAGTGATCTTCAGGAAAACGACTTCTCTGTTAGAAGTAACAGAAGTGGAGCCCTTCATAACGATGGACGTCCTCTGGCTCCTAAACGAACGCAACAGGAGCAACTGCAGCATTGGCAGAAAAATCGGCGAATGCTTGCCTATTCTATAGTTGGAACACCGGATTTTATTGCTCCAGAAGTTCTACTGAAGAAAGGATATGGCTTGGAATGTGATTGGTGGTCTCTAGGAGCTACAATGTATGAAATGCTTGTGGGGTACCCGCCCTTTTATTCAGATGATCCAATATCGACTTGTAGAAAGATAGTAAATTGGAGTACTCATTTAAAATTTCCAGAAGAAGCTAAACTATCAGCAGAGGCAAAGGATCTTCTTTGTAGACTCCTATGTAATGTGGAACAGAGGCTTGGAACCGAAGGAGCCCATGAAATAAAGGCTCACCCTTGGTTCAAAGGTATTGAATGGGACAAATTGTACCAAATGAAAGCTGCTTTTATACCTGAGGTCAATGATGAATTAGATACCCAAAATTTTGAGGAGTTTGAAGAGGTGGACAAGCAAACTGAACCGTCCTCAAAGCCAGGGCCGTGGAGAAAGATGCTTGAATCTATAGATGTTAACTTTGTTGGCTACACATACAACAATTTTGAAATTGTGAATGATCTGAAACACCTGGAAATTGCTGAATTGAAGAAGAGCACATAA 1509 0.4023 METIRRWFSKFKSNDKMKSAKNKETTGMAKEGSKPPTNVEAPSNITKQKVEAAKQYIENHYKKQMQGLQERKERRNMLEKKLADAEVSEEEQSNLLKYLEKKETEYMRLQRLKMGADDFEPLTMIGMGEFGEVRVCREKVTGHVYAMKKLKKSEMLHRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDIMTLLLRKEILTEDEAKFYVGETVLAIESIHKHNYVHRDIKPDSLLLDRNGHMKLSNFGLCKLLDCSDLQENDFSVRSNRSGALHNDGRPLAPKRTQQEQLQHWQKNRRMLAYSIVGTPDFIAPEVLLKKGYGLECDWWSLGATMYEMLVGYPPFYSDDPISTCRKIVNWSTHLKFPEEAKLSAEAKDLLCRLLCNVEQRLGTEGAHEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEEFEEVDKQTEPSSKPGPWRKMLESIDVNFVGYTYNNFEIVNDLKHLEIAELKKST 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1009g00014 502 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Gabi1009g00014 502 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1009g00014 502 MobiDBLite consensus disorder prediction 13 28 - -
Gabi1009g00014 502 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Gabi1009g00014 502 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Gabi1009g00014 502 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Gabi1009g00014 502 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Gabi1009g00014 502 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1009g00014 502 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gabi1009g00014 502 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gabi1009g00014 502 Gene3D Transferase(Phosphotransferase) domain 1 316 436 - -
Gabi1009g00014 502 Gene3D Transferase(Phosphotransferase) domain 1 203 268 - -
Gabi1009g00014 502 MobiDBLite consensus disorder prediction 13 42 - -
Gabi1009g00014 502 CDD MobB_NDR_LATS-like 53 114 - -
Gabi1009g00014 502 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Gabi1009g00014 502 Coils Coil 68 88 - -
Gabi1009g00014 502 CDD STKc_NDR_like 117 482 - -
Gabi1009g00014 502 SUPERFAMILY Protein kinase-like (PK-like) 95 468 IPR011009 -
Gabi1009g00014 502 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Gabi1009g00014 502 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1009g00014 Gabi-Chr1009 133120 163334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1009g00014 1 502 AGC Kinase Gene Family AT4G14350 78.884 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Gabi1009g00014 Pkinase 1.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1009g00014 K08790 - gmx:100795087 907.131