Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1008g00007 ATGGCAACGGCAACATATCCACCACCCCCACCTTATTGCAGACTCTACAAAGATTACTTGCAAGATCTTAAGTCTGCTCCGGAGCCTCCACCACCTATTGAAGGAACTTACGTTTGTTTTGGATGCAATTACACTACTAGTGCCATTCTACCGAGCTTGGAAGAACAAGGGGTGCGCCAGCTCTATTCTAGGGGGCCTAATGTTGATTTCAAAAAGGAGCTGAGGTCACTTAATGGAGACTTGCAACTACATATTCTGGAGCTTGCTGATATTCTTATTGAGAGACCTTCACAGTATGCTAGGAGAGTCGAAGAAATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCACTACGTCCTCATCAGGCAAGAGCAACATTAATTCACATTTTGGAACTTCAGATACAGCGCCGTAAACAAGCAGTGGAGGACATAAAGAGGAGAGAAGAGGCACGAAGACTCCTTAACGAGTGTCTGGCAACACTTGATGGCCATTAG 504 0.4365 MATATYPPPPPYCRLYKDYLQDLKSAPEPPPPIEGTYVCFGCNYTTSAILPSLEEQGVRQLYSRGPNVDFKKELRSLNGDLQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRREEARRLLNECLATLDGH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1008g00007 167 Coils Coil 130 150 - -
Gabi1008g00007 167 Gene3D - 61 158 IPR044888 -
Gabi1008g00007 167 SUPERFAMILY Mediator hinge subcomplex-like 66 152 IPR037212 GO:0016592
Gabi1008g00007 167 Pfam MED7 protein 4 152 IPR009244 GO:0003712|GO:0006357|GO:0016592
Gabi1008g00007 167 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 166 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1008g00007 Gabi-Chr1008 40464 49167 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Gabi1008g00007 Med7 2.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1008g00007 K15148 - gmx:100792250 305.064