Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1008g00004 ATGGCAACGGCAACATATCCACCACCCCCACCTTATTGCAGACTCTACAAAGATTACTTGCAAGATCTTAAGTCTGCTCCGGAGCCTCCACCACCTATTGAAGGAACTTACGTTTGTTTTGGATGCAATTACACTACTAGTGCCATTCTACCGAGCTTGGAAGAACAAGGGGTGCGCCAGCTCTATTCTAGGGGGCCTAATGTTGATTTCAAAAAGGAGCTGAGGTCACTTAATGGAGACTTGCAACTACATATTCTGGAGCTTGCTGATATTCTTATTGAGAGACCTTCACAGTATGCTAGGAGAGTCGAAGAAATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCACTACGTCCTCATCAGGCAAGAGCAACATTAATTCACATTTTGGAACTTCAGATACAGCGCCGTAAACAAGCAGTGGAGGACATAAAGAGACGGAGAGAAGAGGCACGAAGACTCCTTAACGAGTGTCTGGCAACACTTGATGGCCATTAG 507 0.4379 MATATYPPPPPYCRLYKDYLQDLKSAPEPPPPIEGTYVCFGCNYTTSAILPSLEEQGVRQLYSRGPNVDFKKELRSLNGDLQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEARRLLNECLATLDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1008g00004 168 Coils Coil 130 164 - -
Gabi1008g00004 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Gabi1008g00004 168 Gene3D - 61 159 IPR044888 -
Gabi1008g00004 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Gabi1008g00004 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1008g00004 Gabi-Chr1008 40461 49167 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Gabi1008g00004 Med7 1.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1008g00004 K15148 - gmx:100792250 304.679