Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
EuplCTG_34g00034 ATGGATGGAATCAAATATGCAGTATTTACAGACAAAAGTATTCGGTTATTGGGGAACAATCAATATACTTCTAATGTCGAATCAGGATCAACTAGGATAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGCGTCAAGCGTCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAAGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATCTGATAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAGAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTATGGTACAGAAGTTCCTATCTCAATGGGAAATGCCCTACCTTTGAGTTCGATATCATCATATACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGAAAGGGTGGACAATTAGCTAGAGCAGCGGGTGCTGTAGCAAAACTGATTGCAAAAGAGGGTAAATCGGCCACATTAAAATTACCATCTGGGGAGGTCCGTTTGATATCCAAAAACTACTCAGCAATAGTCGGACAAGTGGGTAATGTTGGGGTGAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGTGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGGTGGTGA 804 0.4167 MDGIKYAVFTDKSIRLLGNNQYTSNVESGSTRIEIKHWVELFFGVKRRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEKDISDRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVYGTEVPISMGNALPLSSISSYTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNYSAIVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGW* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
EuplCTG_34g00034 267 Gene3D - 38 127 IPR012340 -
EuplCTG_34g00034 267 Pfam Ribosomal Proteins L2, C-terminal domain 178 266 IPR022669 GO:0003735|GO:0005840|GO:0006412
EuplCTG_34g00034 267 PANTHER RIBOSOMAL PROTEIN L2 47 266 IPR002171 GO:0003735|GO:0005840|GO:0006412
EuplCTG_34g00034 267 SUPERFAMILY Nucleic acid-binding proteins 48 134 IPR012340 -
EuplCTG_34g00034 267 FunFam 50S ribosomal protein L2, chloroplastic 19 124 - -
EuplCTG_34g00034 267 Pfam Ribosomal Proteins L2, RNA binding domain 52 127 IPR022666 GO:0003735|GO:0005840|GO:0006412
EuplCTG_34g00034 267 PIRSF RPL2p_RPL2a_RPL8e_RPL2o 27 149 IPR002171 GO:0003735|GO:0005840|GO:0006412
EuplCTG_34g00034 267 PIRSF RPL2p_RPL2a_RPL8e_RPL2o 175 267 IPR002171 GO:0003735|GO:0005840|GO:0006412
EuplCTG_34g00034 267 SMART Ribosomal_L2_C_2 134 267 IPR022669 GO:0003735|GO:0005840|GO:0006412
EuplCTG_34g00034 267 SUPERFAMILY Translation proteins SH3-like domain 178 267 IPR008991 -
EuplCTG_34g00034 267 SMART Ribosomal_L2_2 52 128 IPR002171 GO:0003735|GO:0005840|GO:0006412
EuplCTG_34g00034 267 Gene3D Ribosomal protein L2, domain 3 240 267 IPR014726 -
EuplCTG_34g00034 267 Gene3D - 128 239 IPR014722 -
EuplCTG_34g00034 267 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 47 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
EuplCTG_34g00034 63 266 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 27.273 2.47e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
EuplCTG_34g00034 K02886 - cave:30215254 360.147