Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
EuplCTG_131g00006 ATGGAGATGATGTACACTGATATCACTCAGGCCCTCAAAGCTAAGGGGATTCAAGCAAACCCTAAGGACTACTTGACATTCTTCTGTCTTGGAAATCGGGAGTTGAAGAAGGATGGAGAGTATGCACCCTCAGAGGAACCGGAGCCTGATACAGATTATAGTAGGGCTCAGCAGGGCCGGCGCTTCATGATCTATGTTCATGCCAAGTTGATGATAGTTGACGATGAATACATAATCATCGGATCCGCCAACATCAACCAGAGGTCAATAGACGGTGCCAGGGATTCTGAGATAGCCATGGGAGCCTACCAACCTCATCACATAGCGACCAGGGAACCAGCCAGGTCCATGGATTTCGTATGGCGTTGTGGTATGAGCACCTCGGCATGCTTGACGCCTCCTTCCTCCAGCCCGGGAGTGTGGAGTGTGTCCGGAAGGGCTTATCTCGTTGGTCTGTTGGAAGACACCAACCTCTGTGCCATCCATGCTAAGAGGGTGACGATCATGCTAAAGGACATTCAACTCGCCAAGCGAATCTATGGCGAACGCGCTTAA 555 0.5081 MEMMYTDITQALKAKGIQANPKDYLTFFCLGNRELKKDGEYAPSEEPEPDTDYSRAQQGRRFMIYVHAKLMIVDDEYIIIGSANINQRSIDGARDSEIAMGAYQPHHIATREPARSMDFVWRCGMSTSACLTPPSSSPGVWSVSGRAYLVGLLEDTNLCAIHAKRVTIMLKDIQLAKRIYGERA* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
EuplCTG_131g00006 184 SMART h35 95 184 IPR000164 GO:0000786|GO:0003677|GO:0030527
EuplCTG_131g00006 184 Pfam Phospholipase D Active site motif 63 89 IPR001736 GO:0003824
EuplCTG_131g00006 184 SUPERFAMILY Histone-fold 147 181 IPR009072 GO:0046982
EuplCTG_131g00006 184 PRINTS Histone H3 signature 162 183 IPR000164 GO:0000786|GO:0003677|GO:0030527
EuplCTG_131g00006 184 PRINTS Histone H3 signature 146 162 IPR000164 GO:0000786|GO:0003677|GO:0030527
EuplCTG_131g00006 184 PANTHER PHOSPHOLIPASE D 1 108 IPR015679 -
EuplCTG_131g00006 184 SUPERFAMILY Phospholipase D/nuclease 52 121 - -
EuplCTG_131g00006 184 Gene3D Histone, subunit A 141 184 IPR009072 GO:0046982
EuplCTG_131g00006 184 Pfam Core histone H2A/H2B/H3/H4 147 179 IPR007125 GO:0003677
EuplCTG_131g00006 184 SMART pld_4 62 89 IPR001736 GO:0003824
EuplCTG_131g00006 184 Gene3D Endonuclease Chain A 4 116 - -
EuplCTG_131g00006 184 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 62 89 IPR001736 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
EuplCTG_131g00006 1 135 Phospholipase D Gene Family (Wang group) AT3G15730 66.197 8.94e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
EuplCTG_131g00006 K01115 - ming:122060550 215.698