Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01335 ATGGAAGGACCACTCATACAGTTTGAGGCTCATACCTCCTCCTATACTTCAACTACCACCACCACCCCTTCTTCCACCACCACCACCACCACCTCCTCCTCCTCCTCCTCATCTTCCTCCTCCGTTTTGGTAACTTTCGCAGGTAAAAACACCTTCTTCGACAAAAATTCGAAGATTCCGACCGAGTCCACAACCAAGAAAGGCTCTAAGAAAGTTCAAGAAGTAGTGAAAGATGACAATGAGACTAGGAAGCCGCACAAGAGCGGTAGTGATGGCAAGCACCCGACTTATCGAGGGGTACGGATGCGCAATTGGGGCAAATGGGTGTCCGAAATTCGCGAGCCGAGAAAGAAGTCAAGAATTTGGCTTGGGACATTCCCCACGCCCGAAATGGCGGCTCGAGCTCACGACGTAGCTGCGCTCACAATCAAAGGTCAATCAGCATACCTCAATTTCCCTGAATTAGCCTCAGAGCTCCCTCGTCCTGCAAGCGCATCACCTAAGGACATTCAAGCAGCAGCCGCAAAAGCAGCTGCAGCTACATTTGGCGAAAATCCCGAAACCGACACGACAAGCCCAACCGAGCTACCAATGTTTCACTCTCCTACTCCGACTACGACATCAGACGACACTCAAGAATCTTCAATTTCTCCTTCCACGGACGACGATGATACATTGTTCGACCTACCCGATCTCTTCCTCGACCTCACTGATCCAATCGACGGGCTTTGTGATTCCTCGTCGTGGCTACGTGACGGCGCTAACATCGGATTCCGACTAGAGGAACCATTCTTATGGGAGTACTACTAG 810 0.5086 MEGPLIQFEAHTSSYTSTTTTTPSSTTTTTTSSSSSSSSSSVLVTFAGKNTFFDKNSKIPTESTTKKGSKKVQEVVKDDNETRKPHKSGSDGKHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALTIKGQSAYLNFPELASELPRPASASPKDIQAAAAKAAAATFGENPETDTTSPTELPMFHSPTPTTTSDDTQESSISPSTDDDDTLFDLPDLFLDLTDPIDGLCDSSSWLRDGANIGFRLEEPFLWEYY* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01335 269 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 46 235 - -
Eupl14g01335 269 Gene3D AP2/ERF domain 96 154 IPR036955 GO:0003700|GO:0006355
Eupl14g01335 269 MobiDBLite consensus disorder prediction 60 98 - -
Eupl14g01335 269 MobiDBLite consensus disorder prediction 9 40 - -
Eupl14g01335 269 Pfam AP2 domain 95 145 IPR001471 GO:0003700|GO:0006355
Eupl14g01335 269 MobiDBLite consensus disorder prediction 184 222 - -
Eupl14g01335 269 MobiDBLite consensus disorder prediction 53 98 - -
Eupl14g01335 269 CDD AP2 97 155 IPR001471 GO:0003700|GO:0006355
Eupl14g01335 269 SMART rav1_2 96 159 IPR001471 GO:0003700|GO:0006355
Eupl14g01335 269 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Eupl14g01335 269 PRINTS Ethylene responsive element binding protein signature 119 135 IPR001471 GO:0003700|GO:0006355
Eupl14g01335 269 ProSiteProfiles AP2/ERF domain profile. 96 153 IPR001471 GO:0003700|GO:0006355
Eupl14g01335 269 SUPERFAMILY DNA-binding domain 96 154 IPR016177 GO:0003677
Eupl14g01335 269 MobiDBLite consensus disorder prediction 161 223 - -
Eupl14g01335 269 MobiDBLite consensus disorder prediction 1 40 - -
Eupl14g01335 269 FunFam Ethylene-responsive transcription factor 2 95 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01335 Eupl-Chr14 31059831 31060959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01335 84 265 AP2-EREBP Transcription Factor Family AT2G44940 55.340 6.56e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl14g01335 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01335 - - tss:122664820 242.276