Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01327 ATGGGGCTCGGGGTTTCTGGCTCGTCTAAGCTGCTAGTAGAACCAGAGATCGAGAGAGCGGCACCTCCACACCCTATTACCATGGGTCGTATGCACTCTCGAGGCAAGGGTATTTCCTCTTCGGCGCTGCCGTACAAGAGGACTCCTCCTAGTTGGCTCAAGACCTCCACTCAAGATGTCGAGGAGAACATCTGCAAGTTCGCGAAGAAGGGTTTAACCCCGTCTCAGATCGGGGTTATTCTTCGTGATTCTCACGGTATCGCTCAGGTCAAAAGTGTTACAGGGAGCAAGATCTTGAGGATTCTCAAGGGCCATGGGCTTGCGCCTGAAATCCCCGAGGACCTGTACCACCTCATCAAGAAGGCTGTAGCAGTCCGGAAGCATCTGGAGAGGAGCAGGAAGGACAAGGATTCTAAGTTTCGGTTGATTCTGGTTGAGAGCAGGATTCACCGTCTCGCTCGCTACTACAAGAGGACGAAGAAGCTCCCGCCTGTCTGGAAATACGAGTCTACCACTGCCAGCACTCTTGTGGCGTAG 537 0.5345 MGLGVSGSSKLLVEPEIERAAPPHPITMGRMHSRGKGISSSALPYKRTPPSWLKTSTQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKGHGLAPEIPEDLYHLIKKAVAVRKHLERSRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTTASTLVA* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01327 178 Hamap 30S ribosomal protein S15 [rpsO]. 30 176 IPR023029 -
Eupl14g01327 178 Pfam Ribosomal protein S15 102 172 IPR000589 GO:0003735|GO:0005840|GO:0006412
Eupl14g01327 178 CDD Ribosomal_S15p_S13e 97 170 IPR000589 GO:0003735|GO:0005840|GO:0006412
Eupl14g01327 178 Pfam Ribosomal S13/S15 N-terminal domain 28 87 IPR012606 GO:0003735|GO:0005840|GO:0006412
Eupl14g01327 178 Gene3D - 110 178 - -
Eupl14g01327 178 SMART Ribosomal_S15_2 97 176 IPR000589 GO:0003735|GO:0005840|GO:0006412
Eupl14g01327 178 FunFam 40S ribosomal protein S13 62 109 - -
Eupl14g01327 178 ProSitePatterns Ribosomal protein S15 signature. 125 155 IPR000589 GO:0003735|GO:0005840|GO:0006412
Eupl14g01327 178 FunFam 40S ribosomal protein S13 110 178 - -
Eupl14g01327 178 SUPERFAMILY S15/NS1 RNA-binding domain 93 169 IPR009068 -
Eupl14g01327 178 Gene3D - 62 109 - -
Eupl14g01327 178 SMART Ribosomal_S13_N_2 28 87 IPR012606 GO:0003735|GO:0005840|GO:0006412
Eupl14g01327 178 PANTHER RIBOSOMAL PROTEIN S15P/S13E 28 178 IPR023029 -
Eupl14g01327 178 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01327 Eupl-Chr14 30779024 30783862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01327 28 178 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 92.053 1.78e-101 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01327 K02953 - dct:110102558 296.975