Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01312 ATGATGATTGAAAAGGAAGATCTTGGTTTGAGTTTGAGCTTGAACTCTACAGAGAGACTACATCCACATCCCTTGCAGTTGAATCTGATGCCTTCTTCGGTTCCTACTTCATCTCCTTCCTCGTTCTTGCTTCAGAAGACTTCTTGGAATGAGGCGTTCTTGTCTTCAGATCGAACTTCAGAGATCTACAGAGGTGAGACAAGATCGTTTCTTCGAGGAATCGATGTGAATCGGATGCCATCAACGGTTGACTGTGAAGAAGAAGCCGGTGTTTCCTCTCCGAACAGCACAATATCGAGCGTAAGCGGGAAGAGAAGCGAGAGAGATCTGAACGGAGAAGAGAACGATATCGATAGGGCTTGTTCTCGTGGAATAAGCGACGAAGAAGACGGAGACACATCGAGGAAGAAACTCAGACTCTCTAAAGATCAATCTGCCATTCTCGAAGAAAGCTTCAAAGAAAACAACACTCTCAACCCTAAGCAAAAACTGGCGTTGGCGAAGCAACTGAGCCTCCGACCTCGACAAGTGGAAGTCTGGTTCCAGAACAGGAGAGCAAGGACGAAGTTGAAGCAAACGGAAGTCGACTGTGAGTTCTTGAAGAGATGCTGTGAGAATTTAACGGAAGAGAACAGAAGGTTACAGAAAGAGGTGCAAGAGCTGAGAGCGCTTAAGCTGTCTCCACAGTTCTACATGCACATGACCCCACCTACAACCCTCACCATGTGCCCATCTTGCGAGCGTGTTGCCGTCTCATCATCGTCCAACACAGCTGCATCCACCGTCGCCGCAGCAACAGCAGCTGTAGATGCTCAATACCACCCAACGGGTCCCCACCACCGTCGCTCCATGCCCATCAACCCTTGGGCTGCCACCCCTGTTCATCACCGATCTTTCGATGCTCCTCCTCGATCGTGA 918 0.4935 MMIEKEDLGLSLSLNSTERLHPHPLQLNLMPSSVPTSSPSSFLLQKTSWNEAFLSSDRTSEIYRGETRSFLRGIDVNRMPSTVDCEEEAGVSSPNSTISSVSGKRSERDLNGEENDIDRACSRGISDEEDGDTSRKKLRLSKDQSAILEESFKENNTLNPKQKLALAKQLSLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVAVSSSSNTAASTVAAATAAVDAQYHPTGPHHRRSMPINPWAATPVHHRSFDAPPRS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01312 305 FunFam Homeobox-leucine zipper protein 18 122 196 - -
Eupl14g01312 305 Coils Coil 190 227 - -
Eupl14g01312 305 SMART HOX_1 133 195 IPR001356 GO:0003677
Eupl14g01312 305 Pfam Homeodomain 135 189 IPR001356 GO:0003677
Eupl14g01312 305 SMART halz 191 234 IPR003106 GO:0006355|GO:0043565
Eupl14g01312 305 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 8 268 - -
Eupl14g01312 305 SUPERFAMILY Homeodomain-like 125 192 IPR009057 -
Eupl14g01312 305 Pfam Homeobox associated leucine zipper 191 225 IPR003106 GO:0006355|GO:0043565
Eupl14g01312 305 ProSiteProfiles 'Homeobox' domain profile. 131 191 IPR001356 GO:0003677
Eupl14g01312 305 MobiDBLite consensus disorder prediction 88 105 - -
Eupl14g01312 305 ProSitePatterns 'Homeobox' domain signature. 166 189 IPR017970 GO:0000981|GO:0006355
Eupl14g01312 305 MobiDBLite consensus disorder prediction 106 138 - -
Eupl14g01312 305 MobiDBLite consensus disorder prediction 273 305 - -
Eupl14g01312 305 Pfam HD-ZIP protein N terminus 2 109 IPR006712 GO:0005634
Eupl14g01312 305 MobiDBLite consensus disorder prediction 83 138 - -
Eupl14g01312 305 CDD homeodomain 135 192 IPR001356 GO:0003677
Eupl14g01312 305 Gene3D - 127 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01312 Eupl-Chr14 30217572 30220224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01312 1 305 Homeobox Transcription Factor Family AT4G16780 62.821 3.04e-112 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl14g01312 HD-ZIP_N 2.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01312 K09338 - nnu:104598440 462.611