Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01306 ATGGGTCAGGGGAATGAAAGCGAGTTGCCTTTGGCAACTCGAGCTATTGAGAAACTGAATCACACTCCATTGAATGGGAAAAATAAAAGAATTATGTGGTCTCATCGTGATTCGGAAGCAAGAAAGAGTGGGATCGGGAATCTGTTTGTGAAGAACCTGAACAATTCGATTGATAATGTGAGGCTTCACGAGATGTTTTCGAAGTTTGGGCACATCTCGTCATGCAAAGTAGTGATGTCCCAGGATGGGAAGAGCAATGGCTATGGCTTTGTCCAGTTTGAGTCTGAGGAATCTGCAAATGCTGCCATGAAGAATCTTAATGGCTCCACAATTGAAGGAAAGCAAATGTTTGTGTGGCGAAAGAAGATAAAGCGTGATGTTGCTCAAGGCCTACCACTTGACATGCTTTCAGTCGAAGCTGAGAAAAAGAGACAAAAAGGAAGGATGGCAGAGATTGAGAAAGTGAAAAAAAGGAGGGAGGAAAGGGCAATTGAAAAGGCACAACATGAGGAGGAAATGGCGATGCTGGCTAGGGAACGTGCTAGGGCTGAGTTCCAAGATTGGGAGAAGAAAGAAGAAGAGTTTCATTTTGATCAAAGCAAAATAAGGTCAGAGATTAGATTGCATGAGGGGCGTACAAAGCCTATTGATATTCTCACCAAGCAGCTTAATGGTTCAGACGACTTTGATATTGAAATAAATGAACCCTACATGGTCTTCAAGGGTTTGACAGCGAAAGATATGGAAGAGCTTCGTGATGACATTAAAATGCATCTGGATCTGGACAGGGCAACTCCGACGCATATAGAGTTCTGGGAGGTTTTATCCCTTTCCCTTCCTCATATAAGTATTAGTGGCCTTATTTTCTCCTTGATAAATTATTTATGTGATCCTGGAACTACAATACTTTTTTTGAGCCCATCTTGA 927 0.4218 MGQGNESELPLATRAIEKLNHTPLNGKNKRIMWSHRDSEARKSGIGNLFVKNLNNSIDNVRLHEMFSKFGHISSCKVVMSQDGKSNGYGFVQFESEESANAAMKNLNGSTIEGKQMFVWRKKIKRDVAQGLPLDMLSVEAEKKRQKGRMAEIEKVKKRREERAIEKAQHEEEMAMLARERARAEFQDWEKKEEEFHFDQSKIRSEIRLHEGRTKPIDILTKQLNGSDDFDIEINEPYMVFKGLTAKDMEELRDDIKMHLDLDRATPTHIEFWEVLSLSLPHISISGLIFSLINYLCDPGTTILFLSPS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01306 308 Gene3D - 12 118 IPR012677 -
Eupl14g01306 308 FunFam Poly(A) binding protein cytoplasmic 1 like 38 127 - -
Eupl14g01306 308 Pfam Conserved mid region of cactin 178 275 IPR018816 -
Eupl14g01306 308 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 123 IPR000504 GO:0003723
Eupl14g01306 308 SMART rrm1_1 47 119 IPR000504 GO:0003723
Eupl14g01306 308 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 115 IPR000504 GO:0003723
Eupl14g01306 308 Gene3D - 42 96 IPR012677 -
Eupl14g01306 308 Coils Coil 150 186 - -
Eupl14g01306 308 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 100 275 - -
Eupl14g01306 308 SUPERFAMILY RNA-binding domain, RBD 31 120 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01306 Eupl-Chr14 30054979 30062942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01306 12 126 Eukaryotic Initiation Factors Gene Family AT4G34110 51.282 1.49e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01306 K25058 - qsa:O6P43_006581 276.559