Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01296 ATGAGTCGAAGGGTGAGGCGGAAAGGGGCACAGTCGAGGGACAAGGAGAAGGTGATTTCACAGAGTTATTTGGAAATTTGCGATGGGAGTTCAAGTTTGGATAGAAAAGGCGAGGTTGATTGGACAGGCTTGCCCGATGATACTGTCATTCAGCTGTTTTCTTGTCTGAATTATCGAGACCGGGCAAGCTTATCTTCAACCTGCCGAACTTGGAGACTTTTAGGTTCTTCTCCTTGTCTATGGAACTCTCTGGATCTTCGTGCACACAAGTGCGATGCTGCCACTGCGGCTTCCATTGCTTCTCGATGTGTCAAGCTTCAGAAGCTTCGGTTCCGTGGACCGGAGTCCGCTAATTCTATAATGAATCTCCAAGCGAGGGGGCTACGTGAAATAAGTGGCGATTTCTGTCGGGAGATTACTGATGCCACTCTCTCAGTGATGGCGGCCCGGCATGAGGCGCTTGAGAGCCTCCAACTTGGGCCGGATTTCTGTGAGAGGATCAGTAGTGATGCTATTAAAGCAGTTGCTCTCTGTTGCCCTAACTTGAAGAGGTTGCGGATTTCTGGACTTAGGGATGTCACTGGAGATGCCATTAACACTTTGGCGAAGCATTGTGGGCAGTTGGCAGAGATTGGGTTCATGGACTGTTTGAATGTTGATGGGGTGGCATTGGGGAATGTGATGTCTCTTCGTTTCCTCTCGGTTGCGGGGACAAGAAACATGAAATGGACTTCAGCATCACAAATTTGGAATAAACTGCCTAACTTGATTGGAATAGATGTTTCGAGAACCGATATTTGTCCGAGCGCTGTTTCGAGTTTGTTGTTGTTGTCACAAAGCTTGATGGTCTTGTGTGCGCTGAACTGTCCGGTTCTTGAAGAAGATGGTAACTATGCATCAAATAATCTCAAACATAAGTTGTTACTTGCCCTTTTCAATGACATTTTTAAAGGAGTAGCTTCATTATTTGCCGATATTACAAAGAAAGAGAGAAATGTGTTTTCGGTTTGGAGAAATTTGAAGAACGGGGATAAGAACTTGAATGAGATTATGATTTGGTTAGAATGGATTCTCTCACACTCACTTCTACGTATTGCTGAGAGCAACCCGCAAGGCTTGGATAGTTTCTGGCTAAAGCAAGGCACTGCGCTGTTGGTCAGTTTGATGCAGAGCTCACAAGAGGATGTCCAAGAAAGGGCGGCCACAGGACTGGCAACTTTTGTCGTCATTGATGACGAAAATGCTACTGTTGATTGTGGAAGGGCGGAGGCAGTCATGCGGGATGGCGGAATAAGCCTTCTTTTAGAACTTGCAAAATCTCGTCGAGAGGGTCTTCAGTCGGAAGCAGCAAAGGCTATAGCAAACTTATCTGTGAATGCAAAAGTTGCAAAAGCTGTTGCGGAAGAAGGGGGAATCAATATTCTTGCTGATCTGGCAAAGTCCAAGAACAGATTAGTTGCTGAAGAGGCTGCTGGAGGACTTTGGAATCTTTCTGTGGGAGAAGAGCACAAGGGTGCCATTGCCTCGGCAGGTGGTGTAAAAGCTTTAGTGGATCTGATTTTTAAATGGCCTTCTGGTGGTGATGGAGTTCTTGAACGTGCTGCTGGTGCACTAGCTAATTTGGCAGCTGATGATAAGTGTAGCATGGAGGTTGCAGTGGTGGGTGGTGTACATGCTCTGGTGATGCTCGCCCGGTCGTGCAAGTTTGAGGGAGTACAAGAGCAGGCAGCTCGTGCCTTGGCTAATTTGGCTGCTCACGGAGATAGCAACAGTAACAATGCTGCTGTTGGAAAGGAAGCAGGTGCACTTGAAGCATTGGTACAACTTACGTGTTCTAACAGTGAAGGTGTCAGGCAAGAAGCTGCTGGTGCTCTGTGGAATTTATCATTCGACGACAGAAATCGTGAAGCAATTGCTGCAGCTGGTGGTGTTGAGGCCTTGATTGCTCTTGCACAAACTTGCTCAAATGCATCCCAAGGTCTTCAAGAAAGGGCTGCAGGCGCTTTGTGGGGATTGTCAGTATCAGAAGCTAATAGCATTGCTATTGGACGAGGAGGAGGTGTTGCTCCTCTTATAGCGTTGGCACGCTCAGAAGCTGAAGATGTCCATGAGACTGCTGCAGGGGCACTTTGGAATCTTGCTTTTAATCCAGGTAATGCTCTTCGTATAGTGGAGGAAGGGGGAGTTCCAGCCCTTGTTCATCTTTGTTCTTCGTCAGTTTCAAAAATGGCTCGTTTCATGGCGGCACTGGCTTTAGCTTACATGTTTGACGGGAGAATGGATGAAGTTGCACTGAAGGGGACTTCATCAGAAGGTATTCCAAAGAGTGTAAGCTTAGATGGTGCTAGAAGGATGGCCTTGAAGCATATTGAAGCTTTCGTGCTTACATTTTCTCATCTACAATCCTTTTCTGCGGCTGCTGCATCATCAGCCAGCGCAGAAGCTGCACGTATACAAGAAGCAGGACATCTGAGATGCAGTGAAGCTGAGATTGGGAGATTTGTTGGCATGCTACGGAATCCTTCTTCCATACTAAAGGCTTGTGCTGCTTTCGCTCTTCTCCAGTTCACCATCCCAGGTGGCCGACATGCAGTTCACCATGCAAGCCTATTGCAGAAAACCAGAGCTGCACGAGTCCTACGTGCCGCTGCTGCAGCAGCAACAGCACCCCGTGAAGCCAAACTGTTCGCAAGGATCGTACTTCGTAACCTCGAGCACCATCATGTAGAGGCTTCAATCTAA 2742 0.4748 MSRRVRRKGAQSRDKEKVISQSYLEICDGSSSLDRKGEVDWTGLPDDTVIQLFSCLNYRDRASLSSTCRTWRLLGSSPCLWNSLDLRAHKCDAATAASIASRCVKLQKLRFRGPESANSIMNLQARGLREISGDFCREITDATLSVMAARHEALESLQLGPDFCERISSDAIKAVALCCPNLKRLRISGLRDVTGDAINTLAKHCGQLAEIGFMDCLNVDGVALGNVMSLRFLSVAGTRNMKWTSASQIWNKLPNLIGIDVSRTDICPSAVSSLLLLSQSLMVLCALNCPVLEEDGNYASNNLKHKLLLALFNDIFKGVASLFADITKKERNVFSVWRNLKNGDKNLNEIMIWLEWILSHSLLRIAESNPQGLDSFWLKQGTALLVSLMQSSQEDVQERAATGLATFVVIDDENATVDCGRAEAVMRDGGISLLLELAKSRREGLQSEAAKAIANLSVNAKVAKAVAEEGGINILADLAKSKNRLVAEEAAGGLWNLSVGEEHKGAIASAGGVKALVDLIFKWPSGGDGVLERAAGALANLAADDKCSMEVAVVGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNAAVGKEAGALEALVQLTCSNSEGVRQEAAGALWNLSFDDRNREAIAAAGGVEALIALAQTCSNASQGLQERAAGALWGLSVSEANSIAIGRGGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVPALVHLCSSSVSKMARFMAALALAYMFDGRMDEVALKGTSSEGIPKSVSLDGARRMALKHIEAFVLTFSHLQSFSAAAASSASAEAARIQEAGHLRCSEAEIGRFVGMLRNPSSILKACAAFALLQFTIPGGRHAVHHASLLQKTRAARVLRAAAAAATAPREAKLFARIVLRNLEHHHVEASI* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01296 913 Coils Coil 435 455 - -
Eupl14g01296 913 Gene3D - 341 481 IPR011989 -
Eupl14g01296 913 Pfam Armadillo/beta-catenin-like repeat 678 714 IPR000225 GO:0005515
Eupl14g01296 913 Pfam Armadillo/beta-catenin-like repeat 593 629 IPR000225 GO:0005515
Eupl14g01296 913 Pfam Armadillo/beta-catenin-like repeat 462 498 IPR000225 GO:0005515
Eupl14g01296 913 Pfam Armadillo/beta-catenin-like repeat 423 457 IPR000225 GO:0005515
Eupl14g01296 913 Pfam Armadillo/beta-catenin-like repeat 545 585 IPR000225 GO:0005515
Eupl14g01296 913 Pfam Armadillo/beta-catenin-like repeat 631 673 IPR000225 GO:0005515
Eupl14g01296 913 Pfam Armadillo/beta-catenin-like repeat 501 543 IPR000225 GO:0005515
Eupl14g01296 913 SUPERFAMILY RNI-like 57 294 - -
Eupl14g01296 913 Gene3D Ribonuclease Inhibitor 34 340 IPR032675 -
Eupl14g01296 913 Pfam F-box-like 43 87 IPR001810 GO:0005515
Eupl14g01296 913 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 642 687 IPR000225 GO:0005515
Eupl14g01296 913 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 429 471 IPR000225 GO:0005515
Eupl14g01296 913 FunFam Protein ARABIDILLO 2 356 503 - -
Eupl14g01296 913 Gene3D - 569 680 IPR011989 -
Eupl14g01296 913 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 470 512 IPR000225 GO:0005515
Eupl14g01296 913 Gene3D - 482 568 IPR011989 -
Eupl14g01296 913 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 511 556 IPR000225 GO:0005515
Eupl14g01296 913 SMART arm_5 631 674 IPR000225 GO:0005515
Eupl14g01296 913 SMART arm_5 544 585 IPR000225 GO:0005515
Eupl14g01296 913 SMART arm_5 716 757 IPR000225 GO:0005515
Eupl14g01296 913 SMART arm_5 418 458 IPR000225 GO:0005515
Eupl14g01296 913 SMART arm_5 675 715 IPR000225 GO:0005515
Eupl14g01296 913 SMART arm_5 459 499 IPR000225 GO:0005515
Eupl14g01296 913 SMART arm_5 590 630 IPR000225 GO:0005515
Eupl14g01296 913 SMART arm_5 500 543 IPR000225 GO:0005515
Eupl14g01296 913 CDD F-box_AtADLO1-like 40 81 - -
Eupl14g01296 913 SMART fbox_2 44 84 IPR001810 GO:0005515
Eupl14g01296 913 Gene3D - 681 759 IPR011989 -
Eupl14g01296 913 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 686 728 IPR000225 GO:0005515
Eupl14g01296 913 SUPERFAMILY ARM repeat 360 746 IPR016024 -
Eupl14g01296 913 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 601 643 IPR000225 GO:0005515
Eupl14g01296 913 PANTHER PROTEIN ARABIDILLO 1 1 910 - -
Eupl14g01296 913 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 555 586 IPR000225 GO:0005515
Eupl14g01296 913 SMART LRR_CC_2 179 204 IPR006553 -
Eupl14g01296 913 SMART LRR_CC_2 205 230 IPR006553 -
Eupl14g01296 913 ProSiteProfiles F-box domain profile. 38 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01296 Eupl-Chr14 29713499 29754353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01296 557 759 U-box Gene Family AT2G23140 35.784 3.29e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01296 - - nnu:104610476 1486.47