Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01272 ATGGCAACACCAGATGAAGCTACGGCCCTCGATCTCATCAGACATCACCTTCTCGGCGATTTCGCCTCTCTTGAAACCTTTCTAACTGATTTCACCTTTACTAACTCGAAAATCTCTGGAAATCAGCCAGAGATTATGTTCTCGCCAACTGATTCCCTCTGTTCACGAACCGCAAGTTTTGAATCTTCGGTTTCGGAGCATAAAAATGACATCTTTAATGATGTTTTTCAGTCTGTATCTCTAGTTTCAGAACCGGAAATTGAAATCTCTGATTACTTGAAGCTCGATGAGGACGATAACAGCGATCTCTTCGAGTTCTTGCCTGATTCGGTCTCTTATCAGAATGATTCCTTCTTTCAATTCGAAACAAAATCTGAAACCCTCACTTCGACATCTTCTCAATCGAGCTTAAAAGATCGCCGACCTTCGTTGAAGATCTCTCTACCTCCTGTGGAGAAAGTCGAGTGGTTTGACTTCACTGAACCGCCTCAACCGGCTGCAACAGTTTCCAACCAAAAACCTTCAGATTCCGACGAGAAGAAACACTACAGAGGCGTACGGCAACGCCCGTGGGGGAAATTCGCTGCGGAGATTCGAGACCCTAACCGTCGAGGGTCTAGGGTTTGGCTTGGAACCTTTGAGACCGCCATCGAAGCTGCTAAAGCTTACGATCGTGCAGCCTTCAAGATGCGTGGGAGCAAAGCCATCCTCAACTTCCCTCTCGAGGCCGGAAAGAATACTGACACACCAGTTAACACTGGTCGGAAAAGACGCAGAGACACTGAACCAGAAGAGAAAAAACAAGTAGAGATGAAGCCGGTTAAGAAGGAGAGATCACCGAAATCTGACATGAAGGCGAGTATTTCGACCGTTGGATCAATAACGCCGTCAAGTTGGACAAACTTTTGGGATGGCTTGGACGTTAAGGGTTTCTTTAACGCCCCTCTACTGTCACCGTTATCTCCACATCCTTCCTTAGGTTATCCACAGCTTATGGTCATCTGA 1005 0.4647 MATPDEATALDLIRHHLLGDFASLETFLTDFTFTNSKISGNQPEIMFSPTDSLCSRTASFESSVSEHKNDIFNDVFQSVSLVSEPEIEISDYLKLDEDDNSDLFEFLPDSVSYQNDSFFQFETKSETLTSTSSQSSLKDRRPSLKISLPPVEKVEWFDFTEPPQPAATVSNQKPSDSDEKKHYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFETAIEAAKAYDRAAFKMRGSKAILNFPLEAGKNTDTPVNTGRKRRRDTEPEEKKQVEMKPVKKERSPKSDMKASISTVGSITPSSWTNFWDGLDVKGFFNAPLLSPLSPHPSLGYPQLMVI* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01272 334 PRINTS Ethylene responsive element binding protein signature 222 242 IPR001471 GO:0003700|GO:0006355
Eupl14g01272 334 PRINTS Ethylene responsive element binding protein signature 183 194 IPR001471 GO:0003700|GO:0006355
Eupl14g01272 334 CDD AP2 181 240 IPR001471 GO:0003700|GO:0006355
Eupl14g01272 334 Gene3D AP2/ERF domain 181 242 IPR036955 GO:0003700|GO:0006355
Eupl14g01272 334 PANTHER DNA-BINDING DOMAIN 135 275 IPR044808 GO:0003700|GO:0009873
Eupl14g01272 334 FunFam Ethylene-responsive transcription factor 2 181 242 - -
Eupl14g01272 334 MobiDBLite consensus disorder prediction 251 283 - -
Eupl14g01272 334 SMART rav1_2 182 246 IPR001471 GO:0003700|GO:0006355
Eupl14g01272 334 MobiDBLite consensus disorder prediction 244 289 - -
Eupl14g01272 334 ProSiteProfiles AP2/ERF domain profile. 182 240 IPR001471 GO:0003700|GO:0006355
Eupl14g01272 334 MobiDBLite consensus disorder prediction 162 186 - -
Eupl14g01272 334 SUPERFAMILY DNA-binding domain 182 241 IPR016177 GO:0003677
Eupl14g01272 334 Pfam AP2 domain 182 232 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01272 Eupl-Chr14 28877923 28879554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01272 1 334 AP2-EREBP Transcription Factor Family AT5G47230 43.188 8.98e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl14g01272 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01272 K09286 - nnu:104598426 407.912