Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01271 ATGTACGGACAGAGTGGCGACTCTGATCTTGCTCTTCTTGAATCGATTCGAAGGCACTTGTTCGACGATTCAGAGTCTCTTATGACTTCTCCGCCTATCAATTCCGCTGATGTTCCGGTTTTTTGCCTGAATACTAGCTTCAATGGTCTTTTTCCTTGTTTGACCGAGAATTGGGGAGATCTGCCGTTAAAGGTAGATGATTCTGAGGATATGCTAGTTTATGGTGTCCTACGTGACGCTGTTAATGTAGGATGGATTCCCTCGCTGGCGCCTGGATCACCTGACTGTGCTCCGTTTAGTCTGATGACGACTGTGGTTAAATCGGAGCCTCAAGATACGACGACGGCGATGACGATGACGGTGAGTTTACCGGATCCGCCGGTTGCATCGGCGAAGTTGGCTGAATCGATGGTGAAGGTGAAGCAGGAGAAATCGACTCCGGTGACTGTTCCGGCGAAAGGGAGGCACTACAGAGGTGTACGGCAACGTCCGTGGGGGAAATTCGCGGCGGAGATCAGAGATCCAGCCAAAAACGGCGCCAGGGTTTGGCTCGGGACGTTCGAGACTGCAGAGGACGCCGCGCTGGCTTACGATCGAGCCGCTTACAGGATGCGCGGCTCGCGTGCTCTACTCAATTTCCCTCTCCGAGTCGGCTCGATTGACTCGGATCCACCGGTGCCAGTGACCTCCAAACGCTCGGAGCCATCTTCGTCCCCATCGTCGTCATCGGGTAACAGCTCATCAAAGCGAAGGAAGAAAGCAGTAAACTCAACAGCTCAGGCTGCTGCGGGTCAAGCCGGGTCGGAAATGAGGAACCGATCCGATGTGTTCCAGGTGGGACACAGGACGGGCCCACTGCCATGTAGCGAGCAATTACTGGTTAGCTAG 888 0.5417 MYGQSGDSDLALLESIRRHLFDDSESLMTSPPINSADVPVFCLNTSFNGLFPCLTENWGDLPLKVDDSEDMLVYGVLRDAVNVGWIPSLAPGSPDCAPFSLMTTVVKSEPQDTTTAMTMTVSLPDPPVASAKLAESMVKVKQEKSTPVTVPAKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVGSIDSDPPVPVTSKRSEPSSSPSSSSGNSSSKRRKKAVNSTAQAAAGQAGSEMRNRSDVFQVGHRTGPLPCSEQLLVS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01271 295 PRINTS Ethylene responsive element binding protein signature 157 168 IPR001471 GO:0003700|GO:0006355
Eupl14g01271 295 PRINTS Ethylene responsive element binding protein signature 180 196 IPR001471 GO:0003700|GO:0006355
Eupl14g01271 295 FunFam Ethylene-responsive transcription factor 2 155 215 - -
Eupl14g01271 295 MobiDBLite consensus disorder prediction 229 267 - -
Eupl14g01271 295 Gene3D AP2/ERF domain 155 217 IPR036955 GO:0003700|GO:0006355
Eupl14g01271 295 SUPERFAMILY DNA-binding domain 156 216 IPR016177 GO:0003677
Eupl14g01271 295 ProSiteProfiles AP2/ERF domain profile. 156 214 IPR001471 GO:0003700|GO:0006355
Eupl14g01271 295 MobiDBLite consensus disorder prediction 221 295 - -
Eupl14g01271 295 Pfam AP2 domain 156 206 IPR001471 GO:0003700|GO:0006355
Eupl14g01271 295 CDD AP2 156 214 IPR001471 GO:0003700|GO:0006355
Eupl14g01271 295 PANTHER DNA-BINDING DOMAIN 132 259 IPR044808 GO:0003700|GO:0009873
Eupl14g01271 295 SMART rav1_2 156 220 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01271 Eupl-Chr14 28834437 28835713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01271 8 224 AP2-EREBP Transcription Factor Family AT4G17500 55.459 5.80e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl14g01271 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01271 K09286 - ming:122069279 312.383