Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01259 ATGGAGGCGTCTTCTTGCTTCTTCTGCGGAGGCATCTCCTCCTCCGTTTCACAGTCGAGCTTCTCTTTCCAGAAGAAGAAGAATGATGATATGTCTTCTTTCCGCCCCATCCGCTTATTCAGAGACAACAACAACCACAACAACAACAACAACCATTCCCTTTTCTTCTCCCACTCTTCTCCTCCCTCGTCTTCTTCTTTCGGGTTCCCCTTCCAACGATTGATCCGCCACAGCACCAACAACACCACCACTGGAACCACCAGCAGCAGCACTCGATCGCCTCCTATTCAACCTGTGAGTCTGCGGAGTCTGTATCAGAATGGAGACCCGCTGGGGCGTAGGGACCTGGGCAAATGCGTTGTGATGTGGATTTGCCAAGGGATGAGGGCCATGGCCTCGGATTTCGCCTCAGCTGAGGTCCAGGGTGAATTCGCTGAGGTCAGGCAGCGCATGGGACCGGGTCTCACCTTCGTTATCCAGTCTCAGCCTTACCTCAATGCCGTCCCTATGCCCCTTGGTCTCGAAGCCCTCTGCTTGAAGGCCTGCACCCACTATCCCACGCTCTTTGATCACTTCCAGAGGGAGTTGAGAGACGTTCTCCAAGACCTCCAGCGCAAATCCATAGTCCATGATTGGCGCAAGACCGACTCATGGAAGCTGCTCAAAGAGCTTGCCAATGCAGCTCAGCACCGAGCTATTGTGCGCAAGGTTCCCCAGTCCAAGCCCGTGCATAGTGGGCTTGGGATGGACCTCGAGAAGGCCAAGGAAATACAGAGCAGGATTGACGACTTTGCGAAACGTATGTCAGATCTTCTTCGAATTGAGCGGGATGCAGAGTTGGAATTTACCCAGGAGGAGTTGAATGCTGTTCCTACACCAGATGAGAATTCCGATTCGTCAAAGCCAATCGAGTACCTTGTCAGCCATGGTCAGGCTCAGCAAGAGCTGTGTGACACTATTTGCAATTTGAATGCAGTCAGTTCTTCTATAGGATTGGGGGGGATGCATTTGGTTTTGTTCAGGGTTGAAGGGAGTCATCGATTGCCACCTACTACACTCTCTCCTGGTGACATGGTTTGTGTGAGAACATGCGATAGCAGGGGTGCTGGTGCAACATCTTGCATGCAAGGCTTTGTTAACAACTTAGGGGAGGATGGGTGTAGCATCAGTGTGGCTTTGGAGTCTCGCCATGGTGATCCCACCTTCTCTAAGCTCTTTGGCAAGAGTGTGCGCATTGATCGTATCCATGGATTGGCTGATGCCCTCACCTACGAGCGCAATTGTGAAGCCCTGATGCTGCTCCAGAAGAATGGTTTGCAGAAGAAAAATCCTTCAATTGCCATAGTGGCCACTCTATTTGGAGACAAAGAAGATGTTGCATGGCTGGAGCAGAATCATTTGGCGGATTGGAGTGAAGCAGAATTGGATGGACTACTAAAACATGGAGTTTATGATGATTCCCAACTAAGAGCAATTGCCTTAGGCTTGAACAAGAAGCGGCCTGTTCTAATTGTCCAAGGGCCTCCTGGTACTGGAAAGACGGGTTTGCTTAAGGAACTTATAGTGCTGGCTGTTCAACAAGGTGAACGGGTGCTTGTAACAGCACCTACTAATGCAGCTGTGGACAACATGGTAGAAAAGCTTTCTAATATTGGACTAAACATTGTTCGTGTTGGAAATCCAGCACGAATATCTACAGCTGTAGCTTCAAAGTCTTTAGGAGAAATCGTTAATTCTAAGCTTGCAACTTTTCTGAAAGAGTTTGAAAGGAAGAAGGCTGATCTAAGAAAGGACCTGAGGCATTGTTTGAAGGATGATTCTTTAGCTGCGGGCATACGCCAGCTGCTAAAACAACTTGGTAAGACACTGAAGAAGAAAGAGAAGGAGACCGTGAAGGAAGTATTGTCAAATGCTGAAGTTGTACTCTCCACTAATACTGGAGCAGCTGATCCTTTGATCCGAAGGTTGGATACCTTTGATCTGGTTGTCATAGATGAAGCTGGGCAAGCGATTGAACCATCATGCTGGATCCCAGTTTTGCAAGGAAAGCGCTGTATACTTGCAGGTGATCAGTGCCAGCTTGCTCCAGTGGTTCTATCAAGAAAAGCCTTAGAGGGTGGACTTGGCATATCTCTTCTAGAGAGAGCATCAGCTTTGCATGAGGGAGTTCTTGCTACCAAGTTGACAAAACAATACAGGATGAATGATGCAATTGCAAGTTGGGCTTCAAAAGAGATGTATGATGGATTATTAGAGTCTTCTCCAACTGTATCGTCACATCTTCTTGTAGATTCTCCATTTATCAAGGCCACATGGATAACTCAGTGCCCATTGCTCTTGCTTGATACACGAATGCCATATGGCAGTTTGTCTGTTGGCTGTGAGGAGCATTTGGACCCAGCTGGCACAGGCTCCTTTTATAATGAAGGGGAAGCAGATATTGTTGTACAGCATGTCTTCTCTTTGATTTATGCTGGAGTTAGCCCGAGAGCCATTGCAGTGCAATCTCCTTATGTTGCTCAAGTACAACTATTGAGGGATAGACTTGATGAGTTGCCAGAAGCTGTGGGCGTTGAGGTTGCAACTGTGGACAGCTTTCAAGGTCGGGAGGCAGATGCAGTAATTATATCAATGGTCCGATCAAACACACTTGGAGCTGTTGGATTCCTGGGTGACAGTAGGCGAATGAATGTTGCCATAACCAGGGCTCGCAAACATGTTGCGGTTGTGTGTGATAGCTCGACCATATGCCACAATACCTTCCTGGCCAGGCTCTTGCGTCATATCCGCCACTTTGGAAGAGTAAAGCATGCCGAGCCTGATACTTTTGGTGGATCTGGACTTAGCATGAACCCCATGTTGCCCTCCATCAGTTGA 2877 0.4821 MEASSCFFCGGISSSVSQSSFSFQKKKNDDMSSFRPIRLFRDNNNHNNNNNHSLFFSHSSPPSSSSFGFPFQRLIRHSTNNTTTGTTSSSTRSPPIQPVSLRSLYQNGDPLGRRDLGKCVVMWICQGMRAMASDFASAEVQGEFAEVRQRMGPGLTFVIQSQPYLNAVPMPLGLEALCLKACTHYPTLFDHFQRELRDVLQDLQRKSIVHDWRKTDSWKLLKELANAAQHRAIVRKVPQSKPVHSGLGMDLEKAKEIQSRIDDFAKRMSDLLRIERDAELEFTQEELNAVPTPDENSDSSKPIEYLVSHGQAQQELCDTICNLNAVSSSIGLGGMHLVLFRVEGSHRLPPTTLSPGDMVCVRTCDSRGAGATSCMQGFVNNLGEDGCSISVALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSIAIVATLFGDKEDVAWLEQNHLADWSEAELDGLLKHGVYDDSQLRAIALGLNKKRPVLIVQGPPGTGKTGLLKELIVLAVQQGERVLVTAPTNAAVDNMVEKLSNIGLNIVRVGNPARISTAVASKSLGEIVNSKLATFLKEFERKKADLRKDLRHCLKDDSLAAGIRQLLKQLGKTLKKKEKETVKEVLSNAEVVLSTNTGAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPVLQGKRCILAGDQCQLAPVVLSRKALEGGLGISLLERASALHEGVLATKLTKQYRMNDAIASWASKEMYDGLLESSPTVSSHLLVDSPFIKATWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEADIVVQHVFSLIYAGVSPRAIAVQSPYVAQVQLLRDRLDELPEAVGVEVATVDSFQGREADAVIISMVRSNTLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIRHFGRVKHAEPDTFGGSGLSMNPMLPSIS* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01259 958 Gene3D - 287 418 - -
Eupl14g01259 958 Gene3D - 732 941 IPR027417 -
Eupl14g01259 958 Gene3D - 267 716 IPR027417 -
Eupl14g01259 958 MobiDBLite consensus disorder prediction 79 99 - -
Eupl14g01259 958 Pfam AAA domain 710 913 IPR041679 -
Eupl14g01259 958 FunFam DNA helicase A 732 940 - -
Eupl14g01259 958 Coils Coil 585 605 - -
Eupl14g01259 958 Coils Coil 609 629 - -
Eupl14g01259 958 SMART AAA_5 499 714 IPR003593 GO:0016887
Eupl14g01259 958 FunFam DNA-binding protein SMUBP-2 isoform X2 287 418 - -
Eupl14g01259 958 CDD SF1_C_Upf1 734 930 IPR047187 -
Eupl14g01259 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 484 921 IPR027417 -
Eupl14g01259 958 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 136 940 - -
Eupl14g01259 958 SMART ultradead3 480 732 IPR014001 -
Eupl14g01259 958 CDD DEXXQc_SMUBP2 485 733 - -
Eupl14g01259 958 Pfam AAA domain 484 700 IPR041677 GO:0004386
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01259 Eupl-Chr14 28154825 28188458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01259 470 673 Core DNA Replication Machinery Family AT1G08840 26.214 2.89e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01259 - - nnu:104610280 1508.04