Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01244 ATGAGTCTCCCTAGTTATGACAGCTGCACTTATTGCATCTTTGACGCTTGGTTCCTTAATCAAGTATCTCCATTTGCCGATCAAATAGAAAAAAAGATACGGATGGGTTATTCATGTGCTTTTGGTGCTACATTATTCATTTATCTTACCGGTTTCTCAAGTTTTTCTGCAGGTAAACTGTGTATTGAAGTCACTCCTGCATCTAAGATTGCTTTCATCTCAGAGGAGTTATGCATTGGATGCGGTATTTGTGTCAAGAAATGCCCATTTGAGGCCATTCAGATAATCAATCTGCCAAAAGATTTGGATAAAGATACAACTCATCGTTATGGCCCAAACACTTTTAAGTTGCACAGGTTACCGGTTCCAAGACCCGGGCAAGTTCTAGGCTTAGTTGGAACAAATGGCATTGGGAAGTCGACTGCCCTCAAAGTGTTGGCTGGGAAGCTGAAACCTAATTTGGGTCGTTTCAATAATCCTCCTGATTGGCAGGAAATATTGACATACTTCCGAGGATCTGAGCTTCAGAACTATTTTACTCGTATTCTAGAAGACAATCTGAAGGCAATAATCAAGCCCCAGTATGTTGATCACATTCCGAAAGCAGTCCAGGGGAATGTTAGGCAAGTTCTTGACCAAAAAGATGAGAGAGAGATGAAGGCTGTACTCTGTAGTGATCTTGATCTGAATCAGGTTATAGATCGGAATGTGGGTGATTTATCAGGTGGAGAGCTTCAGCGATTTGCCATTGCTGTGGTTGCCATACAGAATGCTGAGATATATATGTTTGATGAACCTTCCAGTTTTCTGGATGTAAAACAGAGGCTGAAAGCTGCCCAAGTTGTTCAATCTTTGCTCAGGCCTAACAGCTATGTGATTGTTGTGGAGCATGACCTTAGTGTCCTAGATTACTTGTCAGACTTTATTTGCTGCTTATATGGGAAGCCGGGAGCTTATGGAGTTGTGACCCTTCCTTTCTCTGTTAGAGAAGGAATTAATATCTTTTTAGCTGGATTTGTTCCTACTGAGAATCTACGCTTTCGGGAAGAATCACTTACATTTAAGGTTGCGGAGACTCCGCAAGAAAGCGCTGAAGAGATTCAGACGTATGCACGATATAGATACCCAACCATGAGTAAAACTCAGGGAAATTTCAAAATTCGTGTGATGGAGGGTGAATTCACTGATTCTCAGATTGTTGTAATGCTTGGTGAGAATGGGACGGGGAAGACAACATTCATTCGCATGCTGGCTGGTCTATTGAAGCCTGATGTAGTGGAGGATTCTGATGCAGAAATACCTGAATTCAATGTTTCTTACAAGCCTCAGAAGATCAGTCCAAAATTTCAATCTACTGTCAGACACTTGCTGCATCAAAAAATTCGTGATTCGTACATGCATCCTCAATTTATGTCAGATGTCATGAAACCCCTTCAAATTGAGCAATTAATGGATCAAGAAGTTGTGAATCTCTCTGGTGGGGAATTGCAGAGAGTTGCTCTGTGTCTTTGTCTCGGGAAGCCTGCAGATATATATCTGATAGATGAACCAAGTGCTTATCTTGACTCAGAGCAGCGTATTGTTGCTTCAAAAGTCATAAAAAGGTTTATCCTCCATGCCAAGAAGACTGCTTTTGTTGTTGAGCACGACTTTATAATGGCGACTTACTTGGCAGACAGAGTTATTGTGTACGAGGGGAAACCATCTGTGGATTGTACTGCCAATGCTCCACAGTCCTTGTTGACAGGGATGAACCTTTTCTTATCTCATCTGGATATTACGTTTAGGCGGGATCCAACTAATTATCGCCCACGAATAAACAAATTGGACTCTACGAAAGACAGGGAACAAAAATCTGCTGGGTCCTATTACTACCTTGATGATTGA 1887 0.416 MSLPSYDSCTYCIFDAWFLNQVSPFADQIEKKIRMGYSCAFGATLFIYLTGFSSFSAGKLCIEVTPASKIAFISEELCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVRQVLDQKDEREMKAVLCSDLDLNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSFLDVKQRLKAAQVVQSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFREESLTFKVAETPQESAEEIQTYARYRYPTMSKTQGNFKIRVMEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDVVEDSDAEIPEFNVSYKPQKISPKFQSTVRHLLHQKIRDSYMHPQFMSDVMKPLQIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEGKPSVDCTANAPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAGSYYYLDD* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01244 628 FunFam ATP-binding cassette, sub-family E, member 1 53 355 - -
Eupl14g01244 628 ProSitePatterns ABC transporters family signature. 240 254 IPR017871 GO:0005524|GO:0016887
Eupl14g01244 628 FunFam ATP-binding cassette sub-family E member 1 358 626 - -
Eupl14g01244 628 ProSitePatterns ABC transporters family signature. 491 505 IPR017871 GO:0005524|GO:0016887
Eupl14g01244 628 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 69 98 IPR017896 -
Eupl14g01244 628 Gene3D - 359 626 IPR027417 -
Eupl14g01244 628 Gene3D - 52 355 IPR027417 -
Eupl14g01244 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 93 338 IPR003439 GO:0005524
Eupl14g01244 628 SUPERFAMILY 4Fe-4S ferredoxins 61 147 - -
Eupl14g01244 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 565 IPR027417 -
Eupl14g01244 628 Pfam ABC transporter 125 267 IPR003439 GO:0005524
Eupl14g01244 628 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 IPR017900 -
Eupl14g01244 628 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 55 628 IPR013283 -
Eupl14g01244 628 Pfam ABC transporter 393 519 IPR003439 GO:0005524
Eupl14g01244 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 314 IPR027417 -
Eupl14g01244 628 CDD ABC_RNaseL_inhibitor_domain1 101 355 IPR034348 -
Eupl14g01244 628 SMART AAA_5 396 569 IPR003593 GO:0016887
Eupl14g01244 628 SMART AAA_5 125 317 IPR003593 GO:0016887
Eupl14g01244 628 Pfam 4Fe-4S binding domain 72 94 IPR017896 -
Eupl14g01244 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 367 591 IPR003439 GO:0005524
Eupl14g01244 628 CDD ABC_RNaseL_inhibitor_domain2 373 621 - -
Eupl14g01244 628 PRINTS ABC transporter family E signature 75 99 IPR013283 -
Eupl14g01244 628 PRINTS ABC transporter family E signature 130 155 IPR013283 -
Eupl14g01244 628 PRINTS ABC transporter family E signature 102 122 IPR013283 -
Eupl14g01244 628 PRINTS ABC transporter family E signature 179 205 IPR013283 -
Eupl14g01244 628 PRINTS ABC transporter family E signature 163 179 IPR013283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01244 Eupl-Chr14 27699671 27709603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01244 120 312 Calmodulin-binding Proteins AT2G36910 26.601 3.32e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01244 K06174 - nnu:104608080 1109.75