Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01239 ATGGGGAGACTTCCACACAGCGGAGGCCCAGCCTTCCGCTTCACAGCCACTGAGGTGGCTGAGATGGAGGCTTGTTTGCAAGAAGCCAATAATGCAATACCAAGTCGTGAAGTTCTCGGCACTCTTGCAGAGAAGTTCAGTGCGTCAGCAGATCGAGCAGGAAAGATTGTTGTGCAATCGAAGCAGGTGTGGAATTGGTTCCAAAATAGAAGGTACGCTCAGAAGGCAAAATTGATTAAGGCTCCTGGGAAGCTAAGTGTATCGCCTATGCCTCGTGATGATTTGGTTCAAATGAGAAATGTGCCTCATTCCATACCCATTCCTTCAGGAAGGAATGCTTTGGATAATACTCAGATGGAGTTTGAAGCCAAGTCAGCTAGGGATGGGGCATGGTATGATGTTGCGACTTTTGTTTCTCATAGAATGTTTGAGACAGGTGATCCGGAAGTTCGAGTTCGGTTTTCAGGATTTGGGTCAGAGGAGGATGAGTGGGTTAATGTGCGCAAGCATGTGAGACAACGTTCTCTCCCTTGTGAAGCATCAGAATGTGTTGCCGTACTTCCTGGAGACCTCATTCTTTGTTTTCAGGAAGGTAAAGATCAGGCTCTTTACTTTGATGCGCACGTCCTTGATGCACAAAGACGGAGACATGATGTACGAGGATGTCGCTGTAGGTTCCTCGTTCGTTATGATCATGATCAGTCTGAGGAAATTGTCCCACTGAGAAAGGTGTGCCGTCGGCCAGAAACTGATTACAGGTTGCAACTACTGCATGCTTCAAAGGAGTACACATCCGTGGACCTGCGGAGCACGGGGAAAGATCCTTCTCTTGTTGGCACTTCAAGGGATTTCAGTTCTGCAGATCAAAAGACAAGGAAGCAGTATAAACTGGAGGGGAATGCAGATGATGTGGTTTTGGTGACTCCCTCTTCTCATGCCAAAGAGCCCATAACCATGGAAACTACACTGGCAGCAACAATGAAGGCTGAAAATTGTAGTGATAATAATATGGGAACTTCTGATGACCGTACTGGTGATGCTGCGTTGACAGTTGGCACGGCCACCAGCACTGGTACTGGCTCTGGCATGAGTGAAAATATGGAAGAAGGAAGCTAG 1116 0.4749 MGRLPHSGGPAFRFTATEVAEMEACLQEANNAIPSREVLGTLAEKFSASADRAGKIVVQSKQVWNWFQNRRYAQKAKLIKAPGKLSVSPMPRDDLVQMRNVPHSIPIPSGRNALDNTQMEFEAKSARDGAWYDVATFVSHRMFETGDPEVRVRFSGFGSEEDEWVNVRKHVRQRSLPCEASECVAVLPGDLILCFQEGKDQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQLLHASKEYTSVDLRSTGKDPSLVGTSRDFSSADQKTRKQYKLEGNADDVVLVTPSSHAKEPITMETTLAATMKAENCSDNNMGTSDDRTGDAALTVGTATSTGTGSGMSENMEEGS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01239 371 SMART HOX_1 7 81 IPR001356 GO:0003677
Eupl14g01239 371 Gene3D - 116 177 - -
Eupl14g01239 371 CDD homeodomain 13 75 IPR001356 GO:0003677
Eupl14g01239 371 Gene3D - 178 250 - -
Eupl14g01239 371 Gene3D - 10 82 - -
Eupl14g01239 371 MobiDBLite consensus disorder prediction 351 371 - -
Eupl14g01239 371 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 6 306 IPR039276 -
Eupl14g01239 371 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Eupl14g01239 371 MobiDBLite consensus disorder prediction 268 292 - -
Eupl14g01239 371 Pfam Homeodomain 13 75 IPR001356 GO:0003677
Eupl14g01239 371 MobiDBLite consensus disorder prediction 268 285 - -
Eupl14g01239 371 Pfam SAWADEE domain 118 245 IPR032001 GO:0003682
Eupl14g01239 371 SUPERFAMILY Homeodomain-like 6 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01239 Eupl-Chr14 27579602 27628513 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Eupl14g01239 SAWADEE 2.2e-42 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01239 - - ming:122081600 546.584