Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01214 ATGGATGCACGGGAAGCCAGCAGATTAGCTTCTTCTGAACCTCTCGCCGGTATGATGGTGGGCCCCAACCCCTACAGTTCTATGCTGGGTCCCAACTCCTCTGCAGGGATAATGCAAAGCATGCGCCTTCCCTTTAACTCGATGGTTTCTTCTTCTTTATCCAGACCCTCCGATTCCTCCGACCTTCCGTCCTACCATGGTGATGGATCGTCGGGCCTCAGACCCTGCGGTTTTAGCATGGTCAGCGATGAGCCAATGAAGAAGAAAAGAGGAAGACCGAGGAAGTATGGATCCGACGGTGGCATGGCGTTGGCATTGGCTTCTCTCTCTTCGGAGCCTCCCATTCATTCTCCCAATATCCCGTCGTCTGATCAGCATTTTAAGCGGAACCGAGGGCGGCCCCCCGGATCCGGAAAGAAGCAGCAGTTGGATGCCTTGGGGTCAACTGGAATTGCTTTTACTCCACATGTTATCACTGTTAAAGCCGGTGAGGATGTTGCATCAAAGATCATGGCTTTTTTACAGCAAGGGCCACGTACAGTTTGCATTCTCTCTGCAACTGGTGCTATCTGCAATGTCACCCTTCGCCAGCCAGCAACATCTGGTGGCACTGTAACATATGAGGGCCGTTTTGAGATCATCTCTCTATCAGGTTCCTTTTTGCTTACAGAGAGCGGTGGCACCCGCAGCAGGACTGGTGGTATGAGCGTGTCATTGGCGGGTTCAGACGGTCGAGTTTTGGGAGGCGGGGTGGCGGGGATGCTAATGGCAGCAACACCAGTACAGGTTGTCTTGGGCAGCTTCATTGCGGAAGGGAAAAAACCCAAGTCAGAGCTATTGAAACGAGAGCCTTTGTCAGCACTGCCACCACATATGGTGGGTTTAGGGGCAGCGGCTACAGCAGGCAGCCCTCCCTCTCAAGGAACCTCAAGTGAATCATCTGATGAGGCTGGTAGCCACCTTAACCAGGGCTCTGAAGACTGCAACAACACTGGCCAATCCATTCAAAGCATGTCAGCATACTCATCTATCGGCTGGGGGAACTCTTTCTCTGCAAACCCCCACAGACATGACCCCGCGTGA 1083 0.5309 MDAREASRLASSEPLAGMMVGPNPYSSMLGPNSSAGIMQSMRLPFNSMVSSSLSRPSDSSDLPSYHGDGSSGLRPCGFSMVSDEPMKKKRGRPRKYGSDGGMALALASLSSEPPIHSPNIPSSDQHFKRNRGRPPGSGKKQQLDALGSTGIAFTPHVITVKAGEDVASKIMAFLQQGPRTVCILSATGAICNVTLRQPATSGGTVTYEGRFEIISLSGSFLLTESGGTRSRTGGMSVSLAGSDGRVLGGGVAGMLMAATPVQVVLGSFIAEGKKPKSELLKREPLSALPPHMVGLGAAATAGSPPSQGTSSESSDEAGSHLNQGSEDCNNTGQSIQSMSAYSSIGWGNSFSANPHRHDPA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01214 360 MobiDBLite consensus disorder prediction 48 66 - -
Eupl14g01214 360 SMART AT_hook_2 128 140 IPR017956 GO:0003677
Eupl14g01214 360 SMART AT_hook_2 87 99 IPR017956 GO:0003677
Eupl14g01214 360 MobiDBLite consensus disorder prediction 295 334 - -
Eupl14g01214 360 Gene3D - 155 282 - -
Eupl14g01214 360 ProSiteProfiles PPC domain profile profile. 147 291 IPR005175 -
Eupl14g01214 360 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 268 IPR005175 -
Eupl14g01214 360 MobiDBLite consensus disorder prediction 48 143 - -
Eupl14g01214 360 SUPERFAMILY AF0104/ALDC/Ptd012-like 153 270 - -
Eupl14g01214 360 CDD DUF296 154 268 IPR005175 -
Eupl14g01214 360 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 54 326 IPR039605 GO:0003680
Eupl14g01214 360 MobiDBLite consensus disorder prediction 302 334 - -
Eupl14g01214 360 FunFam AT-hook motif nuclear-localized protein 1-like 155 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01214 Eupl-Chr14 26677468 26698183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01214 77 314 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 57.676 1.84e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01214 - - nnu:104606470 452.981