Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01210 ATGGGAAAGAAGAGGAATGAGGAATCTGGAGCAGTAGCAACAGCTGCAAAATCGAAGCCCAGCAAAGAAGCTACCAAAGATGGGAAGAAAGAGAGATTCTCAGTCTCAGCTATGCTCGCCAGTATGGACCAGAAACCCGATAAACCTAAGAAGGCTTCTTCGTCAATCTCTACTAATAAACCCAGAGCCAAAGCAGCGCCCAAACTTCCCTCTTACACTGATGGAATTGATCTTCCTCCCTCCGATGAGGACGACGATGATGGCGAAGACGACCTGAAGAAACCCAATCGGCGACCTGATTCGAAACCCCTAGACGTTGCCGTATCGGACAAGGAATTGAAGAAGCGGGAAAAAAAGGACCAGCTTGCCGCCTACACTGCCGAGCAGACTAGGCAGGAGGCTCTCAGGGATGACCGTGATGCCTTTACCGTTGTAATCGGTAGCCGGGCTTCTATCCTTGATGGAGAAGATGATGCCGATGCTAATGTTAAAGATGTAACAATTGATAACTTCTCTGTGTCAGCTCGAGGGAAAGAGCTCCTCAAGAATGCATCCGTGAAGATCTCTCATGGTAAGAGGTATGGTTTGGTTGGACCCAATGGGATGGGCAAGTCGACATTATTGAAGCTTCTAGCTTGGAGAAAGATCCCTGTACCCAAAAACATTGATGTGCTTTTAGTCGAACAAGAGGTTGTGGGGGATGATAGGACTGCCCTCGAAGCTGTTGTTGCAGCTAACGAAGAGCTTGTCAAGCTCCGTCAAGAGGTAACAGCTCTGCAGAATTCATCGGCTGCTGCTGGAGAAGACGACGACGACGGCAGTGGTGATGATGCAGGAGAGAAGCTTGCTGAATTGTATGACAGACTGCAAGTGATGGGGTCCGATGCAGCCGAGGCTCAGGCATCGAAGATTCTTGCTGGATTGGGTTTCACCAAAGATATGCAGGGCCGGGCTACTCGTTCATTTAGTGGTGGGTGGAGGATGAGAATCTCATTGGCTAGGGCACTGTTTGTGCAGCCAACCCTTCTATTGCTCGACGAACCCACCAACCATCTTGACCTCCGGGCTGTTCTCTGGTTGGAAGAGTATTTGTGCCGATGGAAGAAGACACTTGTTGTGGTCTCCCACGATCGGGATTTCCTCAATACTGTCTGCAATGAGATTATCCATCTTCATGACCAGAAACTCCATTTCTATCGTGGGAATTTCGATGATTTTGAGAGTGGGTACGAGCAGCGCCGCAAGGAGATGAACAAGAAGTTTGAGATTTATGACAAGCAGGTAAAGGCCGCAAAGAGGACGGGGAATAGGATTCAGCAGGAGAAGGTCAAGGATCGAGCCAAGTTTGTTGCAGCCAAAGAAGCCTCAAAGAACAAGGCAAAGGGGAAGGTCGACGAGGACGAGCCCCAACCAGAGGCCCCTAAGAAGTGGAGGGATTATAGTGTGGAGTTCCATTTTCCTGAGCCTACTGAGCTCACCCCACCTCTCTTGCAGCTTATTGAAGTCAGTTTCAAATATCCAAACAGGGAGGATTTTAGGCTCTCGAATGTTGATGTGGGTATTGATATGGGGACTCGTGTCGCAATTGTTGGGCCGAACGGAGCTGGGAAATCTACTCTGCTCAATCTTCTCGCTGGCGATTTGGTCCCCACTGAGGGGGAGATGCGAAGGAGTCAGAAGCTGAGGATTGGGAGATACTCACAGCACTTTGTGGACTTACTGATGATGGAAGAGACCCCGGTCCAATATCTTCTCCGGCTTCATCCAGACCAAGAAGGACTTAGCAAACAGGAGGCAGTCAGAGCAAAATTAGGGAAATTTGGGCTCCCCAGCCATAACCACCTTACTCCTATTGTGAAACTGTCTGGAGGGCAGAAAGCTCGTGTTGTCTTCACATCGATCTCCATGTCAAAGCCCCACATTTTGTTACTGGATGAGCCTACGAACCACCTAGACATGCAGAGCATTGATGCACTGGCTGATGCACTGGATGAATTCACAGGTGGTGTTGTCTTGGTCAGTCATGATTCTAGGCTAATATCACGGGTCTGTGACGACGAAGAGAAGAGCGAAATTTGGGTAGTAGAAAATGGGACTGTGAGAAAATTCCCAGGGACATTTGAGGAGTACAAGGATGAGCTACAGAGAGAGATCAAAGCAGAGGTTGATGATTGA 2175 0.4901 MGKKRNEESGAVATAAKSKPSKEATKDGKKERFSVSAMLASMDQKPDKPKKASSSISTNKPRAKAAPKLPSYTDGIDLPPSDEDDDDGEDDLKKPNRRPDSKPLDVAVSDKELKKREKKDQLAAYTAEQTRQEALRDDRDAFTVVIGSRASILDGEDDADANVKDVTIDNFSVSARGKELLKNASVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRTALEAVVAANEELVKLRQEVTALQNSSAAAGEDDDDGSGDDAGEKLAELYDRLQVMGSDAAEAQASKILAGLGFTKDMQGRATRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDQKLHFYRGNFDDFESGYEQRRKEMNKKFEIYDKQVKAAKRTGNRIQQEKVKDRAKFVAAKEASKNKAKGKVDEDEPQPEAPKKWRDYSVEFHFPEPTELTPPLLQLIEVSFKYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEMRRSQKLRIGRYSQHFVDLLMMEETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEEKSEIWVVENGTVRKFPGTFEEYKDELQREIKAEVDD* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01210 724 MobiDBLite consensus disorder prediction 90 119 - -
Eupl14g01210 724 MobiDBLite consensus disorder prediction 455 474 - -
Eupl14g01210 724 FunFam ABC transporter F family member 4 164 446 - -
Eupl14g01210 724 Coils Coil 242 262 - -
Eupl14g01210 724 Pfam ABC transporter 514 649 IPR003439 GO:0005524
Eupl14g01210 724 ProSitePatterns ABC transporters family signature. 322 336 IPR017871 GO:0005524|GO:0016887
Eupl14g01210 724 SMART AAA_5 523 699 IPR003593 GO:0016887
Eupl14g01210 724 SMART AAA_5 190 402 IPR003593 GO:0016887
Eupl14g01210 724 Coils Coil 108 128 - -
Eupl14g01210 724 Gene3D - 460 724 IPR027417 -
Eupl14g01210 724 Coils Coil 414 434 - -
Eupl14g01210 724 CDD ABCF_EF-3 497 699 - -
Eupl14g01210 724 CDD ABCF_EF-3 166 395 - -
Eupl14g01210 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 476 711 IPR027417 -
Eupl14g01210 724 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 497 722 IPR003439 GO:0005524
Eupl14g01210 724 Pfam ABC transporter 181 350 IPR003439 GO:0005524
Eupl14g01210 724 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 134 718 - -
Eupl14g01210 724 Gene3D - 163 448 IPR027417 -
Eupl14g01210 724 MobiDBLite consensus disorder prediction 1 119 - -
Eupl14g01210 724 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 166 418 IPR003439 GO:0005524
Eupl14g01210 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 415 IPR027417 -
Eupl14g01210 724 FunFam ABC transporter F family member 4 462 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01210 Eupl-Chr14 26548206 26551009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01210 496 709 Calmodulin-binding Proteins AT2G36910 27.917 6.76e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01210 K06184 - nnu:104600385 1207.97