Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01208 ATGGACGGAGTTCACGGTAACACGACGATGGCGAGCTCGAACCCGAACGCGAATGTTCCCCCGCCGTTCCTTAGCAAGACCTACGACATGGTGGACGATCCGTCAACGGACCCGATCGTGTCTTGGAGCCCTAGCAACAACAGCTTCGTTGTCTGGAACCCGCCAGAGTTCGCGAGGGATCTTTTGCCCAAATATTTCAAGCACAATAACTTCTCCAGCTTCGTCAGGCAGTTAAACACCTACGGTTTCAGGAAGGTTGACCCTGACCGCTGGGAATTTGCAAATGAGGGGTTTTTAAGAGGTCAAAAGCACTTGTTGAAGAGTATTAATAGGCGAAAACCCTCCAATGTACATAGTCATCAACAACCTCAAGGACAGACTACTACAGTCGGGGCATGTGTTGAGGTAGGAAAATTTGGGCTCGAGGAGGAGATCGAAAGACTTAAAAGGGACAAGAACGTCCTTATGCAGGAACTGGTTAGGCTAAGACAGCAGCAACAGGCAACTGATCACCAGTTGCAAACCCTGGGGCAGCACCTTCAGGGTATGGAACAGCGGCAGCAACAAATGATGTCATTCCTGGCAAAGGCCATGCAGAGTCCTGGGTTCTTAGCGCAGCTGGTGCAGCAGCAGAATGAGAGTACCAGGCGCATCGCAGGGGTTAACAAGAAACGGAGGCTTCCCAAACGGGAAGATAACTCAGAAGGCAAACATGCCACTGCTCCTGATGGGCAGATCGTTAAGTACCAGCCTCTGATGAATGAGGCAGCAAAAGCAATGCTCAGGCAGATACTGAAGATTGACACATCTCCCAGGCTGGAAATGGACAACAATTCTGAGAGTTTCTTGATTGATGATGTCCCCTCACCGTCCAATGAATTAGACAGTGAGAGCTCTTCAAGTAGGTTCTCTGGAGTGATGCTTTCAGAGGTCTCACCAAAATCGGGGCATTCATATTTGCCGGCGGCCTCAGGATTCCAGGGGATTCGCCCCTCAGCTGCCATATCCGAGATCCAGTCTTCCCCTGCTGTAGTAACAGACATGGTTACAGCATCCCAATTGCCAGATATGAGTGTGCTAGCTGGAGTTGAAGAGAGGGGGCCAATCACTCCTTGCAGGACGGACATGGTTATCCCAGAATTCCCTGAAATACCAGGAATGGTGCTGGAAAGCAATGTTGTTGACATTCCTTGTACTAATTATGTGGGGCCCGAGACCAGGGATGGTGGTTATATGGATCACATATCTGAGGGAGTGGATGGGACAATGTCCTTAGATACTGACAGGTTTTCACCTGATCCTGAGATGGATATCTTGTTGGATGGGATTCCTAAGCTTCCAGGCATAAATGATGCCTTCTGGGAACAATTTCTTAATGTAAGTGAAATCTCAGAGAACACTGATGAGATTGTGTCGAACACACCAGAGGTTGCCAAGGAGGTGATGCAACTTGGGCAGGAGAATGGATGGGACAAGGGTCAGCATATGGACCAGCTCACGGAACAGATGGGGCTTCTGACGTCGGAGATGAAGAGGAAATGA 1542 0.4955 MDGVHGNTTMASSNPNANVPPPFLSKTYDMVDDPSTDPIVSWSPSNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSINRRKPSNVHSHQQPQGQTTTVGACVEVGKFGLEEEIERLKRDKNVLMQELVRLRQQQQATDHQLQTLGQHLQGMEQRQQQMMSFLAKAMQSPGFLAQLVQQQNESTRRIAGVNKKRRLPKREDNSEGKHATAPDGQIVKYQPLMNEAAKAMLRQILKIDTSPRLEMDNNSESFLIDDVPSPSNELDSESSSSRFSGVMLSEVSPKSGHSYLPAASGFQGIRPSAAISEIQSSPAVVTDMVTASQLPDMSVLAGVEERGPITPCRTDMVIPEFPEIPGMVLESNVVDIPCTNYVGPETRDGGYMDHISEGVDGTMSLDTDRFSPDPEMDILLDGIPKLPGINDAFWEQFLNVSEISENTDEIVSNTPEVAKEVMQLGQENGWDKGQHMDQLTEQMGLLTSEMKRK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01208 513 SUPERFAMILY "Winged helix" DNA-binding domain 19 112 IPR036390 -
Eupl14g01208 513 MobiDBLite consensus disorder prediction 222 244 - -
Eupl14g01208 513 MobiDBLite consensus disorder prediction 1 24 - -
Eupl14g01208 513 MobiDBLite consensus disorder prediction 281 300 - -
Eupl14g01208 513 MobiDBLite consensus disorder prediction 1 21 - -
Eupl14g01208 513 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 294 IPR027725 -
Eupl14g01208 513 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g01208 513 FunFam Heat shock transcription factor 1 16 113 - -
Eupl14g01208 513 Coils Coil 138 165 - -
Eupl14g01208 513 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g01208 513 Gene3D - 16 113 IPR036388 -
Eupl14g01208 513 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g01208 513 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g01208 513 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g01208 513 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01208 Eupl-Chr14 26491838 26515093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01208 7 513 HSF AT5G16820 53.398 6.09e-155 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl14g01208 HSF_DNA-bind 3.3e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01208 K09419 - nnu:104588809 725.317